Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
SNX3O60493 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX3O60493 AL137058.3-201ENST00000624531 3099 ntBASIC5.97□□□□□ -1.45
SNX3O60493 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX3O60493 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX3O60493 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX3O60493 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX3O60493 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNX3O60493 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.96□□□□□ -1.45
SNX3O60493 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
SNX3O60493 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNX3O60493 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNX3O60493 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SNX3O60493 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNX3O60493 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNX3O60493 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SNX3O60493 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX3O60493 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX3O60493 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX3O60493 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 AC109638.1-201ENST00000417406 326 ntBASIC5.96□□□□□ -1.46
SNX3O60493 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 RPS7P14-201ENST00000426405 583 ntBASIC5.96□□□□□ -1.46
SNX3O60493 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX3O60493 AL020997.1-201ENST00000446554 349 ntBASIC5.96□□□□□ -1.46
SNX3O60493 ACA64.4-201ENST00000459070 127 ntBASIC5.96□□□□□ -1.46
SNX3O60493 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 AC079080.1-201ENST00000479841 822 ntBASIC5.96□□□□□ -1.46
SNX3O60493 OR7E157P-201ENST00000494376 911 ntBASIC5.96□□□□□ -1.46
SNX3O60493 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.96□□□□□ -1.46
SNX3O60493 OR7E99P-201ENST00000505750 922 ntBASIC5.96□□□□□ -1.46
SNX3O60493 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX3O60493 AC093878.1-201ENST00000515630 432 ntBASIC5.96□□□□□ -1.46
SNX3O60493 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX3O60493 AC008676.3-201ENST00000521237 435 ntBASIC5.96□□□□□ -1.46
SNX3O60493 AL133399.1-201ENST00000527476 298 ntBASIC5.96□□□□□ -1.46
SNX3O60493 PDCL3P1-201ENST00000534575 734 ntBASIC5.96□□□□□ -1.46
SNX3O60493 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX3O60493 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 AC084824.2-201ENST00000548906 345 ntBASIC5.96□□□□□ -1.46
SNX3O60493 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.96□□□□□ -1.46
SNX3O60493 AC007346.2-201ENST00000564816 892 ntBASIC5.96□□□□□ -1.46
SNX3O60493 AL163952.1-202ENST00000569625 600 ntBASIC5.96□□□□□ -1.46
SNX3O60493 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX3O60493 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX3O60493 NDUFA3P1-201ENST00000588007 252 ntBASIC5.96□□□□□ -1.46
SNX3O60493 PCA3_2.1-201ENST00000612507 409 ntBASIC5.96□□□□□ -1.46
SNX3O60493 NF1P10-201ENST00000613227 742 ntBASIC5.96□□□□□ -1.46
SNX3O60493 AC007786.3-201ENST00000615154 596 ntBASIC5.96□□□□□ -1.46
SNX3O60493 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX3O60493 AC009120.7-201ENST00000623452 780 ntBASIC5.96□□□□□ -1.46
SNX3O60493 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX3O60493 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX3O60493 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX3O60493 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX3O60493 AC005702.3-201ENST00000585345 1447 ntBASIC5.96□□□□□ -1.46
SNX3O60493 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 AC095038.1-201ENST00000429248 1591 ntBASIC5.96□□□□□ -1.46
SNX3O60493 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SNX3O60493 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX3O60493 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SNX3O60493 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX3O60493 PARP4P2-201ENST00000446672 3326 ntBASIC5.96□□□□□ -1.46
SNX3O60493 THAP12P9-201ENST00000503971 2360 ntBASIC5.95□□□□□ -1.46
SNX3O60493 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SNX3O60493 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SNX3O60493 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 RNA5SP187-201ENST00000384400 119 ntBASIC5.95□□□□□ -1.46
SNX3O60493 MIR128-2-201ENST00000384893 84 ntBASIC5.95□□□□□ -1.46
SNX3O60493 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNX3O60493 RN7SKP91-201ENST00000410852 288 ntBASIC5.95□□□□□ -1.46
SNX3O60493 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 MYL6P5-201ENST00000412707 459 ntBASIC5.95□□□□□ -1.46
SNX3O60493 AC079809.1-201ENST00000415468 276 ntBASIC5.95□□□□□ -1.46
SNX3O60493 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX3O60493 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 RN7SL836P-201ENST00000476140 296 ntBASIC5.95□□□□□ -1.46
SNX3O60493 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 AP000926.3-201ENST00000497201 299 ntBASIC5.95□□□□□ -1.46
SNX3O60493 ENPP7P3-201ENST00000509123 241 ntBASIC5.95□□□□□ -1.46
SNX3O60493 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 AP001858.2-201ENST00000536213 601 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms