Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.21□□□□□ -1.42
RIPK2O43353 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.21□□□□□ -1.42
RIPK2O43353 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.21□□□□□ -1.42
RIPK2O43353 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.21□□□□□ -1.42
RIPK2O43353 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.21□□□□□ -1.42
RIPK2O43353 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RIPK2O43353 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.21□□□□□ -1.42
RIPK2O43353 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIPK2O43353 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.21□□□□□ -1.42
RIPK2O43353 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIPK2O43353 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RIPK2O43353 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIPK2O43353 AL592429.1-201ENST00000403909 1473 ntBASIC6.21□□□□□ -1.42
RIPK2O43353 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RIPK2O43353 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.21□□□□□ -1.42
RIPK2O43353 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
RIPK2O43353 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RIPK2O43353 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RIPK2O43353 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.21□□□□□ -1.42
RIPK2O43353 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIPK2O43353 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
RIPK2O43353 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
RIPK2O43353 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RIPK2O43353 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIPK2O43353 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIPK2O43353 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RIPK2O43353 RN7SKP128-201ENST00000364270 303 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.2□□□□□ -1.42
RIPK2O43353 AL592114.2-201ENST00000440142 532 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AC239800.1-201ENST00000442049 719 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 RPSAP40-201ENST00000442343 891 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 CUBNP2-201ENST00000443534 1139 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 Z83838.1-202ENST00000456225 839 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AC012123.2-201ENST00000485809 248 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 RPL23AP40-201ENST00000487630 390 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC114940.1-201ENST00000512162 1265 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 RNA5SP418-201ENST00000515951 117 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 IGKV1D-32-201ENST00000517449 318 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC023310.2-201ENST00000553844 547 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC010287.1-201ENST00000566916 357 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AC016839.1-201ENST00000578162 867 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.2□□□□□ -1.42
RIPK2O43353 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC141002.1-201ENST00000607025 279 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
RIPK2O43353 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
RIPK2O43353 GTF2IP4-201ENST00000453092 2054 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIPK2O43353 AL133243.2-201ENST00000610331 1621 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.2□□□□□ -1.42
RIPK2O43353 AC004076.2-201ENST00000620532 3323 ntBASIC6.2□□□□□ -1.42
RIPK2O43353 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RIPK2O43353 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RIPK2O43353 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 CASC19-255ENST00000641733 1385 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.19□□□□□ -1.42
RIPK2O43353 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
RIPK2O43353 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RIPK2O43353 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.19□□□□□ -1.42
RIPK2O43353 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 RNA5SP308-201ENST00000362532 115 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 RNU1-5P-201ENST00000362684 144 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RIPK2O43353 VIM2P-201ENST00000402383 1294 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 RN7SKP166-201ENST00000410812 305 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 PPIAP10-201ENST00000438675 458 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 AC019185.3-201ENST00000438805 323 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.19□□□□□ -1.42
RIPK2O43353 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms