Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RN7SKP5-201ENST00000517045 272 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 OR5D2P-201ENST00000524390 911 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC091167.5-201ENST00000605689 894 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL157762.1-201ENST00000619612 415 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC073488.6-201ENST00000632293 754 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC005618.1-201ENST00000606901 3148 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL353743.3-201ENST00000442109 1468 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC104966.1-201ENST00000467010 1464 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 ZNF402P-201ENST00000404435 3100 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 CDY5P-201ENST00000411487 1580 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 CDY9P-201ENST00000451397 1580 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC125238.2-201ENST00000430003 1440 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL157702.1-201ENST00000398764 426 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL139805.1-201ENST00000407837 289 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 CYCSP52-201ENST00000422857 310 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL157884.1-201ENST00000424561 454 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC079807.1-201ENST00000429993 481 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 NPM1P27-201ENST00000502784 830 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 DPPA3P2-202ENST00000557188 1219 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 GLYATL1P2-202ENST00000588046 902 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC012254.5-201ENST00000623573 478 ntBASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA3F8WFD2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms