Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NDUFB9P1-201ENST00000604683 510 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AL592221.1-201ENST00000605266 382 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AL365181.4-201ENST00000609800 547 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AC012409.3-201ENST00000611343 981 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AL121985.2-201ENST00000621192 555 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 RPL23AP61-201ENST00000623642 466 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 OR7A2P-202ENST00000641312 1219 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AL078595.2-201ENST00000605309 1780 ntBASIC6.52□□□□□ -1.37
SHISA3A0PJX4 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 MAPK10-371ENST00000641952 5209 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL161891.1-201ENST00000621575 4636 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PPIAP22-201ENST00000358455 498 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 RNA5SP218-201ENST00000363188 109 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC006511.2-201ENST00000388966 660 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 RN7SKP85-201ENST00000411349 318 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 BCRP8-201ENST00000412037 255 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 Z83313.1-201ENST00000433780 718 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL354983.1-201ENST00000434580 906 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 SNX18P8-201ENST00000455120 874 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PET100-201ENST00000456958 219 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC135999.1-201ENST00000478962 479 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC109486.1-201ENST00000486833 374 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC021006.1-201ENST00000489849 553 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 RN7SL239P-201ENST00000490061 300 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 WBP1LP4-201ENST00000505043 344 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PABPC1P1-201ENST00000506347 591 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 RN7SKP14-201ENST00000516000 329 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC016957.1-201ENST00000534895 309 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC092868.1-201ENST00000557949 802 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC011260.1-201ENST00000578420 472 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 MIR3714-201ENST00000579507 65 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC012417.1-201ENST00000582307 1039 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 MIR4314-201ENST00000583321 92 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC068020.1-201ENST00000594215 661 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC130352.1-201ENST00000602979 661 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AL136985.2-201ENST00000607372 535 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC026368.1-201ENST00000614934 690 ntBASIC6.51□□□□□ -1.37
SHISA3A0PJX4 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHISA3A0PJX4 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms