Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC006120.1-201ENST00000579375 546 ntBASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC012511.1-201ENST00000608140 449 ntBASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC093388.1-201ENST00000609166 430 ntBASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RN7SL261P-201ENST00000613441 282 ntBASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC132825.8-201ENST00000640783 297 ntBASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL161901.1-201ENST00000624954 3425 ntBASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRBV4-1A0A0J9YWV2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC016583.1-201ENST00000624221 2431 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC079248.1-201ENST00000427568 1546 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MSL3P1-202ENST00000440028 1468 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RNA5SP375-201ENST00000362975 119 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RNA5SP346-201ENST00000363541 121 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RNA5SP85-201ENST00000365378 119 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MIR27A-201ENST00000385073 78 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 TRAV35-201ENST00000390462 330 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RNU6-316P-201ENST00000391027 107 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 CASKP1-201ENST00000412870 582 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 TRBV5-2-201ENST00000489095 273 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC073648.3-201ENST00000504939 925 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 IGKV2-19-201ENST00000518132 283 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC093524.1-201ENST00000564266 1094 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC008555.7-201ENST00000605008 583 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC141002.1-201ENST00000607025 279 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL136097.3-201ENST00000611097 505 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC107308.1-201ENST00000615897 301 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL161756.3-201ENST00000641216 2071 ntBASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRBV4-1A0A0J9YWV2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 MTCO1P8-201ENST00000416914 1523 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms