Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC010343.2-201ENST00000510162 224 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC093816.1-201ENST00000515076 913 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 IGHV4-55-201ENST00000520889 368 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 TDGP1-201ENST00000543961 1229 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 RPL41P2-201ENST00000544920 409 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL121579.2-201ENST00000555466 590 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 TPRX1P1-201ENST00000557620 319 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC026898.1-201ENST00000586404 571 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC073046.2-201ENST00000604756 527 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC068726.1-201ENST00000610993 341 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 MIR6885-201ENST00000612241 66 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 MIR7159-201ENST00000620587 66 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC005899.6-201ENST00000620729 297 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC000095.2-202ENST00000637415 154 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC090220.1-201ENST00000593078 1699 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL136984.1-201ENST00000607611 1893 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL731532.1-201ENST00000623972 4236 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL121839.2-201ENST00000565058 6943 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 AC139426.3-201ENST00000605648 2059 ntBASIC4.71□□□□□ -1.65
HLA-DRB4X5D2U9 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 CYP4F30P-202ENST00000420048 405 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC002127.1-201ENST00000421305 225 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 VTI1BP4-201ENST00000427516 527 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 RPL12P16-201ENST00000431098 498 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC245291.3-201ENST00000443400 292 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 CEACAMP11-201ENST00000455211 583 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 RN7SL643P-201ENST00000471845 291 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 RNA5SP418-201ENST00000515951 117 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 CYCSP25-201ENST00000525280 316 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC135983.3-201ENST00000528049 1226 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 MIR3157-201ENST00000578688 85 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC024255.1-201ENST00000614376 102 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AL138693.1-201ENST00000622219 129 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 AC119674.1-217ENST00000641942 1086 ntBASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DRB4X5D2U9 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms