Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC140063.1-201ENST00000541343 259 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC106785.4-201ENST00000569492 412 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AL078623.1-201ENST00000602702 907 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 DIMT1P1-201ENST00000603970 763 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC012676.3-201ENST00000614983 479 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 MIR6861-201ENST00000618657 64 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AL354718.1-201ENST00000619764 589 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC068880.4-201ENST00000623082 495 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 TMEM30CP-203ENST00000637814 1035 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC104162.1-201ENST00000430831 2382 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 LCOR-201ENST00000286067 4542 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 MTCO1P4-201ENST00000520516 1409 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 RN7SKP86-201ENST00000410454 332 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AL606490.7-201ENST00000433136 191 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 GTF2IP9-201ENST00000502460 301 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 TRAV31-201ENST00000502780 342 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 SNRPCP6-201ENST00000528310 210 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC004775.1-201ENST00000607389 753 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AP002345.2-201ENST00000609961 904 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AP000770.2-201ENST00000623694 100 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AP003476.1-201ENST00000623984 516 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AL356118.1-201ENST00000635272 1078 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AC011592.1-201ENST00000624647 3634 ntBASIC6.67□□□□□ -1.34
PCDHB1Q9Y5F3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 CR382285.2-201ENST00000624662 1495 ntBASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB1Q9Y5F3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms