Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL357094.1-201ENST00000603845 844 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL713998.2-201ENST00000604538 1198 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 GMCL1P2-201ENST00000605230 823 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL356490.1-201ENST00000623079 479 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC097655.1-201ENST00000635075 318 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC007993.1-201ENST00000621298 2430 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC027279.4-201ENST00000624371 2072 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 API5P1-201ENST00000424316 1510 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AL592494.2-201ENST00000425455 1548 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 NCOA4P2-201ENST00000340589 1813 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 MIR620-201ENST00000385232 95 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 YWHAZP6-201ENST00000399764 738 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 NACAP7-201ENST00000407371 609 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 GABARAPL3-201ENST00000412799 354 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC083862.1-201ENST00000427378 1242 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 BX119904.3-201ENST00000428194 957 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 MTCYBP15-201ENST00000433123 1127 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 GAPDHP59-201ENST00000435908 267 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 MTND1P26-201ENST00000440488 538 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 OR2L9P-201ENST00000444456 913 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 RN7SL254P-201ENST00000460609 284 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 RPL5P14-201ENST00000494197 878 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC010460.2-201ENST00000509054 677 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC116158.1-201ENST00000560231 2129 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC079315.1-201ENST00000602952 623 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AL499605.1-201ENST00000604628 403 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 BNIP3P19-201ENST00000605397 577 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AP000770.2-201ENST00000623694 100 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AC018692.2-201ENST00000624130 348 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 LINC02495-203ENST00000636704 242 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 AP000866.6-201ENST00000638898 3579 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 CDY11P-201ENST00000447168 1651 ntBASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CTDP1Q9Y5B0 MTND4P9-201ENST00000507819 1346 ntBASIC7.52□□□□□ -1.2
CTDP1Q9Y5B0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CTDP1Q9Y5B0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
CTDP1Q9Y5B0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CTDP1Q9Y5B0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.52□□□□□ -1.2
CTDP1Q9Y5B0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CTDP1Q9Y5B0 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms