Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC008945.1-201ENST00000505144 499 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 COX6B1P4-201ENST00000519826 484 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AL133399.1-201ENST00000527476 298 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC023968.1-201ENST00000560719 475 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC105036.1-201ENST00000566222 271 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 MIR4732-201ENST00000581873 76 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC024267.2-201ENST00000582737 417 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC005725.1-201ENST00000577346 2607 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AL359976.1-201ENST00000418655 3528 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 AC125238.2-201ENST00000430003 1440 ntBASIC5.48□□□□□ -1.53
RHBDD3Q9Y3P4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC092070.2-203ENST00000598377 3644 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 RNU11-6P-201ENST00000391127 133 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 UBTFL2-201ENST00000411859 1191 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC117434.1-201ENST00000419971 836 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AL645939.3-201ENST00000435408 225 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 PSMD8P1-201ENST00000436275 769 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 WDR82P2-201ENST00000444540 928 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AP003385.3-201ENST00000472498 287 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 RPS7P11-201ENST00000484240 586 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 RN7SKP67-201ENST00000515905 235 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 RNU2-45P-201ENST00000516068 187 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC008429.4-201ENST00000521201 182 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC009120.3-201ENST00000563335 499 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 RN7SL475P-201ENST00000583379 298 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AL589743.6-201ENST00000611025 117 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AL138960.1-201ENST00000613838 513 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC068213.1-201ENST00000625124 226 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 AC093909.5-201ENST00000621839 1799 ntBASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
RHBDD3Q9Y3P4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 AP005432.1-201ENST00000580891 3485 ntBASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.46□□□□□ -1.53
RHBDD3Q9Y3P4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 RNA5SP85-201ENST00000365378 119 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC079922.1-201ENST00000443291 359 ntBASIC5.46□□□□□ -1.54
RHBDD3Q9Y3P4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms