Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 RN7SKP15-201ENST00000364742 309 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AL353626.3-201ENST00000413399 657 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 NME1P1-201ENST00000420914 382 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC106901.1-201ENST00000425086 698 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 RPL5P7-201ENST00000444235 813 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 HMGB1P7-201ENST00000450921 612 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC144530.1-201ENST00000452862 555 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC112206.4-201ENST00000515142 405 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 OR8K2P-201ENST00000524645 927 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC005277.2-201ENST00000617898 390 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC025262.3-201ENST00000623666 360 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AP000577.1-201ENST00000624366 878 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AL139254.3-201ENST00000641097 674 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 CR383656.5-201ENST00000547616 1340 ntBASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SSX2IPQ9Y2D8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 RACGAP1P-201ENST00000550663 1879 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 RNA5SP514-201ENST00000363717 111 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 RPL21P50-201ENST00000417698 477 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC083862.1-201ENST00000427378 1242 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 KCTD9P1-201ENST00000430462 1167 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC007679.3-201ENST00000434035 414 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AP002884.1-201ENST00000479691 655 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC117395.1-201ENST00000487390 403 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC113398.2-201ENST00000507630 558 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 SNORA26.10-201ENST00000516427 141 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 NPIPB14P-203ENST00000532298 987 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC004232.1-201ENST00000571388 208 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 MTCO1P1-201ENST00000624263 1081 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 AC096992.2-201ENST00000609553 1684 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.99□□□□□ -1.29
SSX2IPQ9Y2D8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms