Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 NIPA2P1-201ENST00000426223 976 ntBASIC7.71□□□□□ -1.18
SCN11AQ9UI33 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 AC091078.2-201ENST00000557145 559 ntBASIC7.71□□□□□ -1.18
SCN11AQ9UI33 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SCN11AQ9UI33 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 TMEM75-201ENST00000624314 2165 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 RPS4XP5-201ENST00000419038 768 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 MARK2P12-201ENST00000420129 585 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 NME1P1-201ENST00000420914 382 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 RPS7P3-201ENST00000443360 580 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 OR7E157P-201ENST00000494376 911 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 RNU6-615P-201ENST00000516065 106 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 AC069234.4-201ENST00000621276 412 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 AC119674.1-213ENST00000641177 1386 ntBASIC7.7□□□□□ -1.18
SCN11AQ9UI33 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
SCN11AQ9UI33 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 RN7SKP124-201ENST00000364730 341 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC015983.1-201ENST00000441577 373 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 RPL36AP39-201ENST00000445859 318 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC083795.1-201ENST00000491760 320 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC008536.1-201ENST00000602872 669 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC027334.1-201ENST00000603257 310 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AL031595.3-201ENST00000624919 14262 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 RN7SL860P-201ENST00000473738 223 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AL035690.1-201ENST00000490892 383 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 RN7SL57P-201ENST00000493687 290 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC108043.1-201ENST00000512696 574 ntBASIC7.69□□□□□ -1.18
SCN11AQ9UI33 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCN11AQ9UI33 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 PARP4P2-201ENST00000446672 3326 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 SELENOWP1-201ENST00000322792 252 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 AL022331.1-201ENST00000429025 477 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 FRG2FP-204ENST00000453982 852 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 AC004129.2-201ENST00000457229 287 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms