Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AL161756.3-201ENST00000641216 2071 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 YWHAZP6-201ENST00000399764 738 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AL035696.2-201ENST00000407941 709 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 RPL35AP31-201ENST00000418340 337 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AC092865.3-201ENST00000425390 1026 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 CUBNP2-201ENST00000443534 1139 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AC098818.1-201ENST00000478593 252 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 MRPS21P8-201ENST00000569196 235 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AL512652.1-201ENST00000619006 500 ntBASIC6.5□□□□□ -1.37
SIX2Q9NPC8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIX2Q9NPC8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 RBMY1HP-201ENST00000382759 1389 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 OR10R3P-201ENST00000361688 942 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 MIR191-201ENST00000384873 92 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AL034417.1-201ENST00000399343 800 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AC016027.4-201ENST00000450866 277 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 SUMO2P10-201ENST00000452006 288 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 ACA64.4-201ENST00000459070 127 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 TRBV5-2-201ENST00000489095 273 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AL645933.2-201ENST00000606743 1207 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 MIR6813-201ENST00000621638 56 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AL033543.1-201ENST00000623440 13454 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIX2Q9NPC8 AC130304.1-201ENST00000622942 2385 ntBASIC6.49□□□□□ -1.37
SIX2Q9NPC8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 AC004014.2-201ENST00000623718 5122 ntBASIC6.48□□□□□ -1.37
SIX2Q9NPC8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 SNORD1C-201ENST00000363315 78 ntBASIC6.48□□□□□ -1.37
SIX2Q9NPC8 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SIX2Q9NPC8 AL132875.1-201ENST00000403623 949 ntBASIC6.48□□□□□ -1.37
SIX2Q9NPC8 AL096711.1-201ENST00000404780 554 ntBASIC6.48□□□□□ -1.37
SIX2Q9NPC8 MYL6P5-201ENST00000412707 459 ntBASIC6.48□□□□□ -1.37
SIX2Q9NPC8 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms