Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 KCTD9P6-201ENST00000522306 950 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC138701.1-201ENST00000524329 714 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC113192.3-201ENST00000529152 742 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AP004609.2-201ENST00000532177 190 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC079148.1-201ENST00000565944 819 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC010547.7-201ENST00000570323 333 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC090330.1-201ENST00000588646 764 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 BUB1P1-201ENST00000603541 607 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC025171.4-201ENST00000607250 1047 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AL138955.1-201ENST00000622881 1040 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC073488.6-201ENST00000632293 754 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC083806.2-201ENST00000617795 2685 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC016251.2-201ENST00000623393 3089 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AL929601.4-201ENST00000613011 1341 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 MIR541-201ENST00000401360 84 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 SNORA77.2-201ENST00000408571 112 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 RN7SKP281-201ENST00000410472 352 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 ARAFP1-201ENST00000422172 605 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AL121882.1-201ENST00000422893 417 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC003989.1-201ENST00000434569 565 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC094019.1-201ENST00000434678 472 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AMYP1-201ENST00000440059 1023 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 EIF5AP4-201ENST00000441206 465 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC078857.1-201ENST00000469870 667 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC092902.1-201ENST00000486999 259 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC093763.2-201ENST00000505334 1223 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 OR4V1P-201ENST00000525394 1140 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 MIMT1-201ENST00000597105 1050 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 MTATP6P2-201ENST00000603319 678 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC073046.2-201ENST00000604756 527 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AL356752.1-201ENST00000615844 593 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 OR1N1-202ENST00000619659 939 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AP001962.1-201ENST00000624114 559 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC005839.1-201ENST00000624148 3213 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 AC009452.1-201ENST00000640823 606 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
VTA1Q9NP79 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 CASC19-243ENST00000641588 1546 ntBASIC7.31□□□□□ -1.24
VTA1Q9NP79 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
VTA1Q9NP79 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 1156.3 ms