Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AL022237.1-201ENST00000446663 358 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AC002519.2-203ENST00000567043 837 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 NPIPB1P-202ENST00000588786 828 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AP001823.1-201ENST00000604056 1003 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 MIR6768-201ENST00000610734 72 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AL136097.3-201ENST00000611097 505 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AC006213.6-201ENST00000623722 4179 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.5□□□□□ -1.53
KIAA1549Q9HCM3 AL360271.1-201ENST00000395679 510 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC007568.1-201ENST00000422912 471 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 RPL7AP14-201ENST00000424041 802 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 RPL23AP19-201ENST00000436229 369 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AL645936.1-201ENST00000441979 518 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 SUMO2P10-201ENST00000452006 288 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC060775.1-201ENST00000518241 520 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 MIR6809-201ENST00000612189 116 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC073488.3-201ENST00000631611 778 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC068733.2-201ENST00000605434 1418 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AOX3P-204ENST00000491025 2107 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC123769.2-201ENST00000624332 5984 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 RNU1-134P-201ENST00000362935 165 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC130360.1-201ENST00000425489 1117 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC016027.4-201ENST00000450866 277 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 RPS27AP3-201ENST00000453803 454 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AL157777.1-201ENST00000468100 304 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 IGLVIV-64-201ENST00000518581 301 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC130365.2-201ENST00000525882 1201 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 SCARNA9-201ENST00000530422 353 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC008521.2-201ENST00000591021 259 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 AC096861.1-201ENST00000616652 240 ntBASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KIAA1549Q9HCM3 LINC01616-201ENST00000561816 2280 ntBASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 SNORA21-201ENST00000362423 132 ntBASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 RN7SKP144-201ENST00000411108 279 ntBASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.48□□□□□ -1.53
KIAA1549Q9HCM3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms