Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PRELID1P1-201ENST00000403549 660 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 RPL34P27-201ENST00000428810 349 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AL390879.1-201ENST00000439143 386 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AC016908.1-201ENST00000442571 1219 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 RANP2-201ENST00000456833 229 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AC008945.1-201ENST00000505144 499 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 CYP4F27P-201ENST00000514557 494 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 SUMO2P19-201ENST00000518920 295 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 OR5D2P-201ENST00000524390 911 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 GLYATL1P2-202ENST00000588046 902 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 AC005332.4-201ENST00000592752 579 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 DYNLL1P1-201ENST00000595442 269 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 OR7E91P-202ENST00000642062 1198 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AL121768.1-201ENST00000613917 2544 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 RNA5SP77-201ENST00000365394 120 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 DHFRP2-201ENST00000414224 547 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 LINC00328-2P-201ENST00000436585 219 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 EMC3-AS1-205ENST00000438698 534 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 OR2L9P-201ENST00000444456 913 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 MORF4-201ENST00000447135 971 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC112187.1-201ENST00000455837 479 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 RN7SL643P-201ENST00000471845 291 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 CYCSP25-201ENST00000525280 316 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 DPPA3P2-202ENST00000557188 1219 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AL122023.1-201ENST00000622847 530 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AP003072.5-201ENST00000623872 773 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AKAP17BP-201ENST00000431706 2719 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC114876.1-201ENST00000490962 1366 ntBASIC6.42□□□□□ -1.38
PCDH9Q9HC56 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
PCDH9Q9HC56 SNX18P3-202ENST00000565670 1750 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 RPL7AP51-201ENST00000422016 760 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PCDH9Q9HC56 AL354707.3-201ENST00000427308 331 ntBASIC6.41□□□□□ -1.38
PCDH9Q9HC56 UBE2V2P3-201ENST00000433562 437 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms