Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC008945.1-201ENST00000505144 499 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC097460.2-201ENST00000511857 741 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RNU6-943P-201ENST00000516960 98 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 MIR4685-201ENST00000578185 69 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC024451.4-201ENST00000602578 752 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC025857.2-201ENST00000602711 238 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL035417.2-201ENST00000603887 796 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 SNORD96A-201ENST00000606577 79 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 MIR6085-201ENST00000618314 110 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AC016745.2-201ENST00000608834 3443 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 AP001541.1-201ENST00000623322 1904 ntBASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SND1-IT1Q9HBX3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AL590635.1-201ENST00000406314 586 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AL139184.1-202ENST00000422303 222 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AL157884.1-201ENST00000424561 454 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 RBMY2JP-201ENST00000425544 1059 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PRUNEP1-201ENST00000425846 705 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC009362.1-201ENST00000427253 406 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC073410.1-201ENST00000435125 589 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 KRT8P51-201ENST00000438938 274 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 RAB28P2-201ENST00000454299 641 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 OR9A1P-202ENST00000484361 945 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 RN7SL284P-201ENST00000498823 275 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 MRPL57P6-201ENST00000506570 309 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 ST13P12-201ENST00000508958 1094 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 RN7SL311P-201ENST00000579858 306 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC099777.1-201ENST00000603779 1070 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC024085.1-201ENST00000604299 432 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 RNA5SP439-201ENST00000617595 124 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC127071.2-201ENST00000623293 527 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC009950.2-201ENST00000636548 183 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AL355834.1-201ENST00000556602 3965 ntBASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 AC092111.2-201ENST00000611627 1414 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms