Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.21□□□□□ -1.41
VIPAS39Q9H9C1 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
VIPAS39Q9H9C1 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 MIR128-2-201ENST00000384893 84 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 RANP6-201ENST00000413691 644 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 CRIP1P1-201ENST00000427567 185 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 GAPDHP38-201ENST00000503632 1002 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC111000.5-201ENST00000506559 1178 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 OR7E158P-201ENST00000524483 910 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC026956.1-201ENST00000558741 396 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 MIR5682-201ENST00000584864 76 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC119403.2-201ENST00000590960 598 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 MIR6762-201ENST00000613340 86 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC063952.1-203ENST00000634410 658 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AC010266.2-201ENST00000564741 3255 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 MTCO1P46-201ENST00000451639 1491 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 MAPK10-328ENST00000641553 4009 ntBASIC6.21□□□□□ -1.42
VIPAS39Q9H9C1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 PARP4P2-201ENST00000446672 3326 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 PRPS1P2-201ENST00000430496 937 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AC096632.2-201ENST00000438139 1239 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 CBX1P2-201ENST00000453841 458 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 NATP-201ENST00000523491 878 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 HIGD1AP9-201ENST00000550710 279 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 BMS1P8-201ENST00000565049 1178 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 RN7SL475P-201ENST00000583379 298 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 NDUFA3P1-201ENST00000588007 252 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AL513327.3-201ENST00000602618 469 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AL162574.1-201ENST00000615702 950 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AC005753.1-201ENST00000623837 618 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AC138965.3-201ENST00000623875 498 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 OR2A3P-202ENST00000641249 1776 ntBASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VIPAS39Q9H9C1 AL137058.3-201ENST00000624531 3099 ntBASIC6.19□□□□□ -1.42
VIPAS39Q9H9C1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VIPAS39Q9H9C1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VIPAS39Q9H9C1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VIPAS39Q9H9C1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
VIPAS39Q9H9C1 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms