Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AL158062.1-201ENST00000619632 745 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC106782.7-201ENST00000624024 418 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC133555.5-201ENST00000624430 418 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AL357140.4-201ENST00000636827 412 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC008957.3-201ENST00000624112 2242 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC116158.1-201ENST00000560231 2129 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 RNU6-236P-201ENST00000363886 106 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 MTND4P13-201ENST00000402078 1023 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 ZNF37CP-201ENST00000406795 241 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 RNU4-22P-201ENST00000411058 166 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC107081.1-201ENST00000414975 361 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AL161742.1-201ENST00000418154 584 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 RPL7P34-201ENST00000433316 712 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC097499.1-201ENST00000444277 208 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 PTGES3P5-201ENST00000455109 434 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 H3F3AP5-201ENST00000475267 429 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC087672.1-201ENST00000479876 766 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 DUX4L52-201ENST00000549363 777 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC024614.1-201ENST00000577546 307 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 SNORD39.2-201ENST00000579995 76 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC015801.1-201ENST00000585651 153 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 BNIP3P24-201ENST00000593398 557 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 RN7SL680P-201ENST00000620379 299 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC022743.1-201ENST00000624990 664 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 FKBP1AP4-201ENST00000631775 336 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 CASC19-281ENST00000642118 1554 ntBASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM55Q9BYV6 AC005034.3-201ENST00000604845 1747 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms