Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 NIPA2P1-201ENST00000426223 976 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 SPRYD7P1-201ENST00000443861 570 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 EEF1B2P6-201ENST00000445713 673 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AC092824.1-201ENST00000483524 576 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 RN7SL184P-201ENST00000488308 297 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AC024940.4-201ENST00000605507 246 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AC007204.2-201ENST00000615022 616 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 MIR7155-201ENST00000615925 56 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 TTC3P1-201ENST00000399586 6081 ntBASIC9.2□□□□□ -0.94
SCAPERQ9BY12 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SCAPERQ9BY12 AC024587.1-201ENST00000505925 2157 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 RN7SKP128-201ENST00000364270 303 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AC016739.1-201ENST00000405359 345 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 RPS15AP30-201ENST00000420976 390 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 CYCSP51-201ENST00000443545 318 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 RN7SL57P-201ENST00000493687 290 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 NDUFA5P12-201ENST00000503796 343 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AC108043.1-201ENST00000512696 574 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AC015818.6-201ENST00000584274 634 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 LAPTM4BP2-201ENST00000604542 446 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AC141002.1-201ENST00000607025 279 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 AC105114.1-201ENST00000624795 1862 ntBASIC9.19□□□□□ -0.94
SCAPERQ9BY12 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
SCAPERQ9BY12 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 SELENOWP1-201ENST00000322792 252 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 OTX2P1-201ENST00000450956 354 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AC114728.1-201ENST00000488289 483 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 SNORA58-201ENST00000505219 137 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AC093763.2-201ENST00000505334 1223 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AC110056.1-201ENST00000525759 911 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 RPA2P3-201ENST00000533268 770 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 FAM27E4-201ENST00000605259 342 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 CR383656.5-201ENST00000547616 1340 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 MAPK10-323ENST00000641493 3207 ntBASIC9.18□□□□□ -0.94
SCAPERQ9BY12 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC9.18□□□□□ -0.94
SCAPERQ9BY12 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 AK4P4-201ENST00000419465 646 ntBASIC9.17□□□□□ -0.94
SCAPERQ9BY12 RPS23P1-201ENST00000491662 432 ntBASIC9.17□□□□□ -0.94
SCAPERQ9BY12 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC9.17□□□□□ -0.94
SCAPERQ9BY12 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 503.7 ms