Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC138907.8-201ENST00000623981 2256 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC018717.1-201ENST00000457712 1505 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 ZNF402P-201ENST00000404435 3100 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 AC016583.1-201ENST00000624221 2431 ntBASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
HDHD3Q9BSH5 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC024651.2-201ENST00000562480 2098 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC093297.3-201ENST00000607056 2517 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 RPL11P4-201ENST00000332269 436 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 MIR431-201ENST00000385266 114 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 MTND2P12-201ENST00000417560 1252 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 GPN3P1-201ENST00000423883 535 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 RPL31P11-202ENST00000454082 372 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AP004607.5-201ENST00000532034 217 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AL049779.3-201ENST00000557141 606 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 NIFKP4-201ENST00000567275 1192 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC024267.2-201ENST00000582737 417 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC026898.1-201ENST00000586404 571 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 CLUHP10-201ENST00000631979 980 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 XKRY2-202ENST00000623874 1581 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 XKRY-202ENST00000624960 1581 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 CASC19-246ENST00000641625 1606 ntBASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.11□□□□□ -1.59
HDHD3Q9BSH5 AL591135.1-201ENST00000401578 5914 ntBASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 AL121839.2-201ENST00000565058 6943 ntBASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 ELOBP4-201ENST00000423418 296 ntBASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 OR6R1P-201ENST00000431838 940 ntBASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 MSL3P1-202ENST00000440028 1468 ntBASIC5.1□□□□□ -1.59
HDHD3Q9BSH5 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms