Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.12□□□□□ -1.27
HPS3Q969F9 AC091965.3-201ENST00000506236 208 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.12□□□□□ -1.27
HPS3Q969F9 BCAS2P1-201ENST00000528022 632 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.12□□□□□ -1.27
HPS3Q969F9 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 TPRX1P1-201ENST00000557620 319 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.12□□□□□ -1.27
HPS3Q969F9 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC7.12□□□□□ -1.27
HPS3Q969F9 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.12□□□□□ -1.27
HPS3Q969F9 AC090616.1-201ENST00000583895 447 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.12□□□□□ -1.27
HPS3Q969F9 PPATP2-201ENST00000605635 508 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 AL008723.3-201ENST00000608926 449 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 AC211486.4-201ENST00000621495 113 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 MIR6503-201ENST00000622884 86 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HPS3Q969F9 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 RPL31P11-201ENST00000426558 1558 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 BIN2P1-201ENST00000504996 1530 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AC011815.2-201ENST00000618230 2021 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 OR56A4-201ENST00000330728 1209 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AL391419.1-201ENST00000398901 1275 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 RNA5SP115-201ENST00000411160 107 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AC098592.2-201ENST00000413158 265 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AL357078.2-201ENST00000416486 427 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AC128677.1-201ENST00000436016 442 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 WDR82P2-201ENST00000444540 928 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AL034369.1-201ENST00000453808 477 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AC135999.1-201ENST00000478962 479 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 RN7SL413P-201ENST00000482700 297 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 RNU6-1334P-201ENST00000516032 105 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AC026790.2-201ENST00000606282 430 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 MIR6085-201ENST00000618314 110 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AC074276.2-201ENST00000619891 348 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.11□□□□□ -1.27
HPS3Q969F9 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HPS3Q969F9 AP000547.3-204ENST00000588548 2523 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 AL137058.3-201ENST00000624531 3099 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.11□□□□□ -1.27
HPS3Q969F9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HPS3Q969F9 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.11□□□□□ -1.27
HPS3Q969F9 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
HPS3Q969F9 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HPS3Q969F9 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms