Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 RNF2P1-201ENST00000442955 1010 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC023274.2-201ENST00000445264 521 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 MTND5P8-201ENST00000449817 1083 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 MTND6P8-201ENST00000503471 522 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC027229.1-201ENST00000583887 253 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC012065.3-201ENST00000602736 439 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 MIR7854-201ENST00000620068 65 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC010872.1-201ENST00000624225 675 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC004023.1-201ENST00000561473 1744 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 THAP12P8-201ENST00000447914 2115 ntBASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATG4AQ8WYN0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AP001157.1-201ENST00000550837 2339 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 SNORA72.3-201ENST00000365074 132 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC019178.1-201ENST00000392337 440 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 RBBP4P5-201ENST00000398583 1266 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AL358178.1-201ENST00000407698 397 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 RN7SKP205-201ENST00000410999 307 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 HMGA1P8-201ENST00000414130 321 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC006509.1-201ENST00000420788 634 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC092646.1-201ENST00000427142 901 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 MTND4LP14-201ENST00000429447 288 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 COL11A2P1-205ENST00000441798 676 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 OR13K1P-201ENST00000444577 975 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AL354872.1-201ENST00000456361 967 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 RN7SL350P-201ENST00000492591 299 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC016550.1-201ENST00000505348 785 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC134698.1-201ENST00000511619 643 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC093664.1-201ENST00000511779 289 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 RNU6-760P-201ENST00000516078 97 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AP001804.1-201ENST00000526868 919 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC007494.1-201ENST00000562293 760 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 OR4C49P-201ENST00000563891 900 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AL671309.1-201ENST00000603750 544 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 BNIP3P31-201ENST00000604515 566 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AL008582.1-201ENST00000609612 442 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC090772.4-201ENST00000623599 362 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AC092692.1-201ENST00000623625 2595 ntBASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.54□□□□□ -1.36
ATG4AQ8WYN0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC125238.2-201ENST00000430003 1440 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AL022323.4-201ENST00000623980 13120 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 SNORD16-201ENST00000362803 99 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 MIR433-201ENST00000384837 93 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 MIR27A-201ENST00000385073 78 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AL117344.1-201ENST00000407196 616 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms