Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AL590399.2-201ENST00000427536 309 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 OR6R1P-201ENST00000431838 940 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 TPRX1P1-201ENST00000557620 319 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AC025283.1-201ENST00000572039 734 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 RN7SL66P-201ENST00000582099 264 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 MIR212-201ENST00000586026 110 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AC068726.1-201ENST00000610993 341 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 MIR6885-201ENST00000612241 66 ntBASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTN4IP1Q8WWV3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MIR551B-201ENST00000384984 96 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 RNU11-201ENST00000387069 134 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL445238.1-204ENST00000400311 463 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL731534.1-201ENST00000434711 269 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC128677.1-201ENST00000436016 442 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC124891.1-201ENST00000536322 519 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 RPL41P2-201ENST00000544920 409 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC027229.1-201ENST00000583887 253 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MIR132-201ENST00000591554 101 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL360012.1-201ENST00000602813 131 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC073046.2-201ENST00000604756 527 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AL031658.2-201ENST00000616850 651 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MIR7159-201ENST00000620587 66 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 AC005899.6-201ENST00000620729 297 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 KYNUP3-201ENST00000574386 1341 ntBASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.17□□□□□ -1.58
RTN4IP1Q8WWV3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms