Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNA5SP339-201ENST00000390987 122 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 RPL35AP24-201ENST00000413846 330 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC024587.1-201ENST00000505925 2157 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 MAPK10-263ENST00000641052 4307 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 MIR550A3-201ENST00000390735 95 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 MIR1204-201ENST00000408388 67 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 OR6E1P-201ENST00000414424 923 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC012557.1-201ENST00000607115 611 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 MIR8080-201ENST00000622224 89 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 MRE11P1-201ENST00000464884 2127 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 TTLL7-201ENST00000260505 7976 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC016739.1-201ENST00000405359 345 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AL606490.8-201ENST00000441624 319 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC025809.2-201ENST00000625085 1802 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 MTHFD2P5-201ENST00000320415 844 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 RPS26P13-201ENST00000419030 330 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 RPSAP50-201ENST00000481955 852 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 OR7E157P-201ENST00000494376 911 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC084337.1-201ENST00000524809 686 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AP001922.4-201ENST00000526967 290 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 AC116631.1-202ENST00000640984 683 ntBASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ALMS1Q8TCU4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 CLCA3P-203ENST00000490028 2781 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 RPEP1-201ENST00000504507 658 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC024558.1-201ENST00000505008 528 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AC079414.3-201ENST00000612986 1090 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AL118522.2-201ENST00000616045 615 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 FO082842.1-201ENST00000423552 1370 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 AL137918.1-201ENST00000624542 1922 ntBASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ALMS1Q8TCU4 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms