Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC104843.2-201ENST00000427666 297 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC010886.1-201ENST00000437380 2869 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL590609.1-201ENST00000442164 328 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC114755.5-201ENST00000447760 831 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AP000542.1-201ENST00000448473 371 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL392003.2-201ENST00000451015 679 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL672167.3-201ENST00000465951 960 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 SNX5P1-201ENST00000505757 1041 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC098799.2-201ENST00000509466 868 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 HNRNPA1P38-201ENST00000523612 957 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC008734.2-201ENST00000595277 477 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC004009.2-201ENST00000623016 728 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AP000648.2-201ENST00000624182 404 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 AC119674.1-213ENST00000641177 1386 ntBASIC7.65□□□□□ -1.18
DEPDC4Q8N2C3 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
DEPDC4Q8N2C3 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 DBF4P1-201ENST00000412976 1892 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 USP46-207ENST00000508499 1419 ntTSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC114786.1-201ENST00000512892 1415 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 Y_RNA.9-201ENST00000362354 101 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 SNORD3G-201ENST00000362796 215 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RNU4-76P-201ENST00000364509 141 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RN7SKP48-201ENST00000365031 328 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC007066.1-201ENST00000392902 381 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RN7SKP169-201ENST00000411124 291 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC138393.2-201ENST00000414742 246 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPL12P27-201ENST00000414870 496 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 MTCYBP24-201ENST00000420387 1106 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC093698.1-201ENST00000423843 571 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPL23AP4-201ENST00000427757 463 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 RPSAP8-201ENST00000429844 889 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AL662791.1-201ENST00000441992 928 ntBASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.64□□□□□ -1.19
DEPDC4Q8N2C3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms