Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MTCYBP44-201ENST00000514835 823 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 RNU6-718P-201ENST00000516166 105 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 SCARNA15.1-201ENST00000516384 125 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC124891.1-201ENST00000536322 519 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 BMS1P15-201ENST00000554269 1141 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 BGLT3-201ENST00000564523 994 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC002400.1-201ENST00000569310 726 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 FGF7P1-201ENST00000582820 288 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 OR5AH1P-201ENST00000595968 283 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 C8orf59P2-201ENST00000603441 271 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 CUX2P1-201ENST00000606426 298 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 Y_RNA.804-201ENST00000615262 101 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AL096816.1-201ENST00000623300 2920 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 SNORA30B-201ENST00000365319 129 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 SNORA51.7-201ENST00000384171 134 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 RPL5P5-201ENST00000392009 893 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 RPL24P7-201ENST00000399435 453 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 RPL5P34-201ENST00000426545 891 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC104651.1-201ENST00000427559 735 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC093392.2-201ENST00000450682 337 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 RN7SL58P-201ENST00000473445 294 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 RPS4XP6-201ENST00000477670 797 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC018475.1-201ENST00000478358 465 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC084878.1-201ENST00000480555 648 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 SSX8-201ENST00000506270 579 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC117522.1-201ENST00000509821 380 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC010285.3-201ENST00000511668 676 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC097460.2-201ENST00000511857 741 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 RNU6-507P-201ENST00000516045 100 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 MTCYBP19-201ENST00000517463 1124 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 NPM1P6-201ENST00000521088 871 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
ATG4DQ86TL0 OR11H3P-201ENST00000554547 982 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 NMNAT1P5-201ENST00000559657 841 ntBASIC6.73□□□□□ -1.33
ATG4DQ86TL0 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms