Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RN7SKP288-201ENST00000516227 268 ntBASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 AC008937.3-201ENST00000606813 1700 ntBASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42BPAQ5VT25 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AC061975.7-201ENST00000592016 2692 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 MAPK10-365ENST00000641902 3825 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 COL6A4P1-202ENST00000487147 4317 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 CFL1P1-202ENST00000432948 411 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AL163193.1-201ENST00000444895 788 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 RPL32P9-201ENST00000487963 407 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AOX3P-204ENST00000491025 2107 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 IGBP1P1-201ENST00000554337 1009 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 MIR1269B-201ENST00000580405 75 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 AC089998.1-201ENST00000548575 3141 ntBASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
CDC42BPAQ5VT25 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 NANOGP4-201ENST00000427230 913 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 RPL38P3-201ENST00000484463 213 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 HMGB1P42-201ENST00000532126 553 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 HSPE1P2-201ENST00000554777 306 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 PPATP2-201ENST00000605635 508 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC211433.2-201ENST00000608433 387 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC068870.2-201ENST00000620635 389 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC005618.1-201ENST00000606901 3148 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 SRRM1P3-201ENST00000426911 2678 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC009120.1-201ENST00000493458 473 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC109481.1-201ENST00000509173 282 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 GARSP1-201ENST00000570895 719 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 MIR8080-201ENST00000622224 89 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 AC136428.4-201ENST00000634254 1155 ntBASIC8.97□□□□□ -0.97
CDC42BPAQ5VT25 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.96□□□□□ -0.97
CDC42BPAQ5VT25 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 FAM32BP-201ENST00000344033 333 ntBASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 RNA5SP131-201ENST00000365452 119 ntBASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 OR13K1P-201ENST00000444577 975 ntBASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 RN7SL826P-201ENST00000479724 288 ntBASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 AC008953.1-201ENST00000497334 318 ntBASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.96□□□□□ -0.98
CDC42BPAQ5VT25 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms