Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC8.14□□□□□ -1.11
CALD1Q05682 AC073389.3-201ENST00000609434 935 ntBASIC8.14□□□□□ -1.11
CALD1Q05682 MIR6780B-201ENST00000610307 79 ntBASIC8.14□□□□□ -1.11
CALD1Q05682 AL080312.2-201ENST00000613001 630 ntBASIC8.14□□□□□ -1.11
CALD1Q05682 AL031658.2-201ENST00000616850 651 ntBASIC8.14□□□□□ -1.11
CALD1Q05682 MIR6721-201ENST00000617181 87 ntBASIC8.14□□□□□ -1.11
CALD1Q05682 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.14□□□□□ -1.11
CALD1Q05682 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CALD1Q05682 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.14□□□□□ -1.11
CALD1Q05682 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.14□□□□□ -1.11
CALD1Q05682 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CALD1Q05682 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CALD1Q05682 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CALD1Q05682 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CALD1Q05682 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CALD1Q05682 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 AL022323.4-201ENST00000623980 13120 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.13□□□□□ -1.11
CALD1Q05682 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC8.13□□□□□ -1.11
CALD1Q05682 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.13□□□□□ -1.11
CALD1Q05682 AL590399.4-201ENST00000436561 601 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.13□□□□□ -1.11
CALD1Q05682 AC019084.1-201ENST00000457337 432 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 RN7SL165P-201ENST00000477476 291 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 RPL34P33-201ENST00000486062 334 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.13□□□□□ -1.11
CALD1Q05682 MAST4-IT1-201ENST00000514241 658 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.13□□□□□ -1.11
CALD1Q05682 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC8.13□□□□□ -1.11
CALD1Q05682 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 MIR4701-201ENST00000583094 63 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.13□□□□□ -1.11
CALD1Q05682 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.13□□□□□ -1.11
CALD1Q05682 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 AC137695.1-201ENST00000604126 489 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 AL591167.1-201ENST00000607321 456 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 MIR7109-201ENST00000613748 65 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 AC004836.1-201ENST00000623032 634 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 AP001052.1-201ENST00000626421 99 ntBASIC8.13□□□□□ -1.11
CALD1Q05682 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
CALD1Q05682 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CALD1Q05682 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CALD1Q05682 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CALD1Q05682 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
CALD1Q05682 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CALD1Q05682 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CALD1Q05682 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CALD1Q05682 LINC01616-201ENST00000561816 2280 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 AL133243.2-201ENST00000610331 1621 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 MIR1275-201ENST00000408770 80 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 RN7SKP108-201ENST00000411367 328 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.12□□□□□ -1.11
CALD1Q05682 RPL5P7-201ENST00000444235 813 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 AC010240.2-201ENST00000445363 1205 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.12□□□□□ -1.11
CALD1Q05682 MARK2P8-201ENST00000476069 952 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.12□□□□□ -1.11
CALD1Q05682 AC024405.1-201ENST00000532521 1042 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CALD1Q05682 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.12□□□□□ -1.11
CALD1Q05682 AC027229.1-201ENST00000583887 253 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.12□□□□□ -1.11
CALD1Q05682 AC009237.12-201ENST00000604755 742 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CALD1Q05682 AC018659.2-201ENST00000624690 715 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.12□□□□□ -1.11
CALD1Q05682 TEX41-271ENST00000628213 993 ntTSL 5 BASIC8.12□□□□□ -1.11
CALD1Q05682 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC8.12□□□□□ -1.11
CALD1Q05682 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CALD1Q05682 OLMALINC-203ENST00000641087 3779 ntBASIC8.12□□□□□ -1.11
CALD1Q05682 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC8.12□□□□□ -1.11
CALD1Q05682 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CALD1Q05682 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.12□□□□□ -1.11
CALD1Q05682 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CALD1Q05682 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CALD1Q05682 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CALD1Q05682 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CALD1Q05682 SNORA43.1-201ENST00000364863 140 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms