Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CX3CL1P78423 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.22□□□□□ -1.57
CX3CL1P78423 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CX3CL1P78423 AC062022.1-201ENST00000451026 1684 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CX3CL1P78423 AC010894.1-201ENST00000313760 361 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 PPIAP24-201ENST00000328558 471 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 FAM32BP-201ENST00000344033 333 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CX3CL1P78423 RANP6-201ENST00000413691 644 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AL589794.1-201ENST00000424971 390 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 MTND4LP14-201ENST00000429447 288 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CL1P78423 HMGN1P32-201ENST00000441744 256 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 RPL31P20-201ENST00000449593 360 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.22□□□□□ -1.57
CX3CL1P78423 NPM1P9-201ENST00000453156 844 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 RPL31P11-202ENST00000454082 372 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AKR1D1P1-201ENST00000457236 936 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AK4P6-201ENST00000505168 528 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 NPM1P21-201ENST00000513394 762 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 RNU6-319P-201ENST00000516025 108 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.22□□□□□ -1.57
CX3CL1P78423 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CL1P78423 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 OR52K3P-201ENST00000531655 943 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CX3CL1P78423 AC005519.1-201ENST00000554490 601 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 ADAD1P2-201ENST00000588476 646 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CL1P78423 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AL157899.1-201ENST00000604110 936 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 U91328.4-201ENST00000608919 517 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 U1.41-201ENST00000617626 165 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 TCL6_3.1-201ENST00000619064 137 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AP001264.1-201ENST00000620602 703 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC073488.9-201ENST00000631601 754 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 AC135068.11-201ENST00000636378 921 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.22□□□□□ -1.57
CX3CL1P78423 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.22□□□□□ -1.57
CX3CL1P78423 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.22□□□□□ -1.57
CX3CL1P78423 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.22□□□□□ -1.57
CX3CL1P78423 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CX3CL1P78423 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CX3CL1P78423 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.21□□□□□ -1.57
CX3CL1P78423 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CX3CL1P78423 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CX3CL1P78423 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC114876.1-201ENST00000490962 1366 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CX3CL1P78423 RNU4-39P-201ENST00000362455 127 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 RNA5SP308-201ENST00000362532 115 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 RNU1-5P-201ENST00000362684 144 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 SNORA7A-201ENST00000384765 139 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CX3CL1P78423 MIR1266-201ENST00000408125 84 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 RNA5SP155-201ENST00000411154 129 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.21□□□□□ -1.58
CX3CL1P78423 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CX3CL1P78423 AC007568.1-201ENST00000422912 471 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 MTCO1P45-201ENST00000431457 267 ntBASIC5.21□□□□□ -1.58
CX3CL1P78423 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.21□□□□□ -1.58
CX3CL1P78423 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms