Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC104849.1-201ENST00000462623 405 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC106800.2-201ENST00000514009 1103 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 OSBPL9P5-201ENST00000542581 171 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC092375.1-201ENST00000550410 637 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.11□□□□□ -1.43
CLRN1P58418 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.11□□□□□ -1.43
CLRN1P58418 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 AL356801.1-201ENST00000559320 294 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC020914.7-201ENST00000594477 545 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 Z94722.1-201ENST00000604328 474 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC004908.1-201ENST00000606572 541 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC091768.1-201ENST00000609258 930 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.11□□□□□ -1.43
CLRN1P58418 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 AC091304.6-201ENST00000619761 202 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC012629.3-201ENST00000623397 328 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CLRN1P58418 MAPK10-365ENST00000641902 3825 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.11□□□□□ -1.43
CLRN1P58418 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 AL359715.3-201ENST00000569267 2123 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 AL022323.4-201ENST00000623980 13120 ntBASIC6.11□□□□□ -1.43
CLRN1P58418 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CLRN1P58418 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.11□□□□□ -1.43
CLRN1P58418 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CLRN1P58418 ASNSP6-201ENST00000592770 1618 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 FO082842.1-201ENST00000423552 1370 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CLRN1P58418 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 PPIAP26-201ENST00000377951 522 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 MIR513B-201ENST00000385136 84 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC008171.1-201ENST00000395058 200 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 ATP5F1P2-201ENST00000398143 760 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 NPM1P37-201ENST00000403105 874 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 SNORA11D-201ENST00000408548 128 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 SNORA11E-201ENST00000408778 128 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 RPL5P2-201ENST00000429598 854 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.1□□□□□ -1.43
CLRN1P58418 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLRN1P58418 PHB2P1-201ENST00000434943 890 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
CLRN1P58418 BX005266.3-201ENST00000443013 1075 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AL354714.5-201ENST00000450131 590 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 GOT2P2-201ENST00000450663 1251 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AL929410.2-201ENST00000451170 189 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CLRN1P58418 MED28P7-201ENST00000456611 530 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 NAP1L1P3-201ENST00000462291 880 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 RN7SL216P-201ENST00000471607 298 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.1□□□□□ -1.43
CLRN1P58418 AC026254.2-201ENST00000475295 371 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 AC004263.1-201ENST00000479327 332 ntBASIC6.1□□□□□ -1.43
CLRN1P58418 RN7SL705P-201ENST00000481678 294 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms