Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 Z95114.1-201ENST00000624264 14574 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PKNOX1P55347 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PKNOX1P55347 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6□□□□□ -1.45
PKNOX1P55347 DNM1P47-203ENST00000571780 12667 ntBASIC6□□□□□ -1.45
PKNOX1P55347 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
PKNOX1P55347 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 AC140134.1-201ENST00000511830 3544 ntBASIC6□□□□□ -1.45
PKNOX1P55347 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PKNOX1P55347 SNORD1C-201ENST00000363315 78 ntBASIC6□□□□□ -1.45
PKNOX1P55347 RNU1-49P-201ENST00000363468 159 ntBASIC6□□□□□ -1.45
PKNOX1P55347 RNA5SP85-201ENST00000365378 119 ntBASIC6□□□□□ -1.45
PKNOX1P55347 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6□□□□□ -1.45
PKNOX1P55347 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6□□□□□ -1.45
PKNOX1P55347 UBTFL2-201ENST00000411859 1191 ntBASIC6□□□□□ -1.45
PKNOX1P55347 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 RPS7P14-201ENST00000426405 583 ntBASIC6□□□□□ -1.45
PKNOX1P55347 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 OR6R1P-201ENST00000431838 940 ntBASIC6□□□□□ -1.45
PKNOX1P55347 AL365220.1-201ENST00000432923 399 ntBASIC6□□□□□ -1.45
PKNOX1P55347 AL731534.1-201ENST00000434711 269 ntBASIC6□□□□□ -1.45
PKNOX1P55347 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 AL590399.4-201ENST00000436561 601 ntBASIC6□□□□□ -1.45
PKNOX1P55347 PPIAP10-201ENST00000438675 458 ntBASIC6□□□□□ -1.45
PKNOX1P55347 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6□□□□□ -1.45
PKNOX1P55347 POU5F1P5-201ENST00000445059 658 ntBASIC6□□□□□ -1.45
PKNOX1P55347 UBE2V2P4-201ENST00000447495 259 ntBASIC6□□□□□ -1.45
PKNOX1P55347 RPL23AP60-201ENST00000450011 454 ntBASIC6□□□□□ -1.45
PKNOX1P55347 AL034369.1-201ENST00000453808 477 ntBASIC6□□□□□ -1.45
PKNOX1P55347 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6□□□□□ -1.45
PKNOX1P55347 SNX18P24-201ENST00000505249 671 ntBASIC6□□□□□ -1.45
PKNOX1P55347 OR5D2P-201ENST00000524390 911 ntBASIC6□□□□□ -1.45
PKNOX1P55347 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6□□□□□ -1.45
PKNOX1P55347 AC037479.1-201ENST00000558361 625 ntBASIC6□□□□□ -1.45
PKNOX1P55347 AC027796.1-201ENST00000575593 512 ntBASIC6□□□□□ -1.45
PKNOX1P55347 AC090774.2-201ENST00000584708 322 ntBASIC6□□□□□ -1.45
PKNOX1P55347 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 AC093388.1-201ENST00000609166 430 ntBASIC6□□□□□ -1.45
PKNOX1P55347 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6□□□□□ -1.45
PKNOX1P55347 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6□□□□□ -1.45
PKNOX1P55347 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6□□□□□ -1.45
PKNOX1P55347 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6□□□□□ -1.45
PKNOX1P55347 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6□□□□□ -1.45
PKNOX1P55347 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6□□□□□ -1.45
PKNOX1P55347 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6□□□□□ -1.45
PKNOX1P55347 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 AC024651.2-201ENST00000562480 2098 ntBASIC6□□□□□ -1.45
PKNOX1P55347 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6□□□□□ -1.45
PKNOX1P55347 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PKNOX1P55347 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 KYNUP3-201ENST00000574386 1341 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.99□□□□□ -1.45
PKNOX1P55347 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.99□□□□□ -1.45
PKNOX1P55347 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PKNOX1P55347 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.99□□□□□ -1.45
PKNOX1P55347 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.99□□□□□ -1.45
PKNOX1P55347 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PKNOX1P55347 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PKNOX1P55347 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PKNOX1P55347 AL121977.1-201ENST00000401636 979 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 AL360013.1-201ENST00000419031 858 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.99□□□□□ -1.45
PKNOX1P55347 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.99□□□□□ -1.45
PKNOX1P55347 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.99□□□□□ -1.45
PKNOX1P55347 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 222.3 ms