Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC10.62□□□□□ -0.71
SMARCA4P51532 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC10.62□□□□□ -0.71
SMARCA4P51532 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SMARCA4P51532 AL357752.1-201ENST00000412817 349 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 OR7E116P-201ENST00000448529 957 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 RN7SL808P-201ENST00000496066 299 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC10.62□□□□□ -0.71
SMARCA4P51532 OR5D15P-201ENST00000531671 942 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 HMGN2P6-201ENST00000551091 273 ntBASIC10.62□□□□□ -0.71
SMARCA4P51532 CCL14-204ENST00000622526 472 ntTSL 3 BASIC10.62□□□□□ -0.71
SMARCA4P51532 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC10.62□□□□□ -0.71
SMARCA4P51532 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SMARCA4P51532 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC10.61□□□□□ -0.71
SMARCA4P51532 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
SMARCA4P51532 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 GAPDHP24-201ENST00000328713 983 ntBASIC10.61□□□□□ -0.71
SMARCA4P51532 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SMARCA4P51532 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC10.61□□□□□ -0.71
SMARCA4P51532 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 AC073610.1-201ENST00000489971 396 ntBASIC10.61□□□□□ -0.71
SMARCA4P51532 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC10.61□□□□□ -0.71
SMARCA4P51532 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC10.61□□□□□ -0.71
SMARCA4P51532 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC10.61□□□□□ -0.71
SMARCA4P51532 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SMARCA4P51532 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
SMARCA4P51532 ALB-209ENST00000503124 1741 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 MORF4L1P4-201ENST00000450245 976 ntBASIC10.6□□□□□ -0.71
SMARCA4P51532 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 AC091685.2-201ENST00000454924 864 ntBASIC10.6□□□□□ -0.71
SMARCA4P51532 RPL35AP28-201ENST00000459730 331 ntBASIC10.6□□□□□ -0.71
SMARCA4P51532 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 HSPE1P2-201ENST00000554777 306 ntBASIC10.6□□□□□ -0.71
SMARCA4P51532 OR4H6P-201ENST00000563771 921 ntBASIC10.6□□□□□ -0.71
SMARCA4P51532 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC10.6□□□□□ -0.71
SMARCA4P51532 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC10.6□□□□□ -0.71
SMARCA4P51532 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 AP002364.1-201ENST00000623330 3386 ntBASIC10.6□□□□□ -0.71
SMARCA4P51532 MAPK10-338ENST00000641647 3362 ntBASIC10.6□□□□□ -0.71
SMARCA4P51532 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SMARCA4P51532 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA4P51532 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
SMARCA4P51532 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 FBXL21-201ENST00000297158 1305 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 TANK-205ENST00000405852 2155 ntTSL 5 BASIC10.59□□□□□ -0.71
SMARCA4P51532 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 U8.4-201ENST00000363626 134 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 HIST1H3PS1-201ENST00000404612 417 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC10.59□□□□□ -0.71
SMARCA4P51532 RPL12P3-201ENST00000440080 396 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 AURKAPS1-201ENST00000451805 1212 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 AL606490.1-201ENST00000452266 765 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 AC112187.1-201ENST00000455837 479 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 DCN-210ENST00000547568 823 ntTSL 3 BASIC10.59□□□□□ -0.71
SMARCA4P51532 SETP3-201ENST00000581726 813 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC10.59□□□□□ -0.71
SMARCA4P51532 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC10.59□□□□□ -0.71
SMARCA4P51532 AP002884.5-201ENST00000595053 1132 ntBASIC10.59□□□□□ -0.71
SMARCA4P51532 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SMARCA4P51532 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SMARCA4P51532 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SMARCA4P51532 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SMARCA4P51532 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC10.59□□□□□ -0.71
SMARCA4P51532 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC10.59□□□□□ -0.71
SMARCA4P51532 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
SMARCA4P51532 RNA5SP30-201ENST00000365552 115 ntBASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms