Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDE6BP35913 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.12□□□□□ -1.11
PDE6BP35913 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
PDE6BP35913 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PDE6BP35913 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDE6BP35913 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8.12□□□□□ -1.11
PDE6BP35913 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PDE6BP35913 LYPLA1P3-201ENST00000402650 695 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 PCNPP4-201ENST00000414817 517 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 RN7SL870P-201ENST00000460111 296 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 AC023194.2-201ENST00000465398 406 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 AC025458.1-201ENST00000506046 166 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 C1GALT1P2-201ENST00000510813 1104 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PDE6BP35913 IGKV3D-25-201ENST00000519599 235 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PDE6BP35913 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.12□□□□□ -1.11
PDE6BP35913 AC073111.2-201ENST00000605657 1075 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.12□□□□□ -1.11
PDE6BP35913 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.12□□□□□ -1.11
PDE6BP35913 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
PDE6BP35913 AC129778.1-202ENST00000623812 261 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 AP000577.1-201ENST00000624366 878 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 AL591379.1-207ENST00000635982 261 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDE6BP35913 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
PDE6BP35913 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDE6BP35913 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDE6BP35913 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.12□□□□□ -1.11
PDE6BP35913 AC083806.2-201ENST00000617795 2685 ntBASIC8.12□□□□□ -1.11
PDE6BP35913 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.12□□□□□ -1.11
PDE6BP35913 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.12□□□□□ -1.11
PDE6BP35913 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PDE6BP35913 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PDE6BP35913 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
PDE6BP35913 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 OR4C1P-202ENST00000641065 1569 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.11□□□□□ -1.11
PDE6BP35913 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
PDE6BP35913 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PDE6BP35913 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PDE6BP35913 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.11□□□□□ -1.11
PDE6BP35913 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PDE6BP35913 SNORA51.9-201ENST00000384295 124 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 SNORA17A-201ENST00000391185 133 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 RN7SKP271-201ENST00000410528 320 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 CDY17P-201ENST00000414121 1282 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 IGLV3-4-201ENST00000432300 244 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 ZNF736P6Y-201ENST00000447526 1213 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC002486.2-201ENST00000447806 590 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 RN7SL174P-201ENST00000475578 289 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 RN7SL104P-201ENST00000498686 293 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 AC112225.1-201ENST00000508230 297 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 AC095052.1-201ENST00000509955 863 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC034244.2-201ENST00000514668 858 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 RNA5SP206-201ENST00000516703 121 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC8.11□□□□□ -1.11
PDE6BP35913 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 MRPS21P8-201ENST00000569196 235 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.11□□□□□ -1.11
PDE6BP35913 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.11□□□□□ -1.11
PDE6BP35913 AC010333.3-201ENST00000615100 402 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC018692.2-201ENST00000624130 348 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC010608.3-201ENST00000625048 527 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.11□□□□□ -1.11
PDE6BP35913 SNORA17.5-201ENST00000630429 132 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 AC103703.1-201ENST00000634783 663 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 MTCO1P11-201ENST00000429111 1528 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.11□□□□□ -1.11
PDE6BP35913 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.11□□□□□ -1.11
PDE6BP35913 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDE6BP35913 AC079949.2-201ENST00000617117 2933 ntBASIC8.11□□□□□ -1.11
PDE6BP35913 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms