Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HOXC12P31275 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HOXC12P31275 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 AC027279.4-201ENST00000624371 2072 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 AL589993.1-201ENST00000407450 2524 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 RNU6-623P-201ENST00000363143 105 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 RNU4-24P-201ENST00000364565 139 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HOXC12P31275 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HOXC12P31275 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 AL121977.1-201ENST00000401636 979 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXC12P31275 FBP2P1-202ENST00000424473 530 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 E2F6P1-201ENST00000428850 745 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 SNX18P14-201ENST00000429308 574 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 GAPDHP34-201ENST00000432112 823 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 PHB2P1-201ENST00000434943 890 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 PA2G4P6-201ENST00000438325 1197 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 MTCO2P3-201ENST00000442543 421 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXC12P31275 GTF2F2P2-201ENST00000445825 721 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AC104389.2-201ENST00000450768 887 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AC233982.1-201ENST00000451247 436 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AC092754.2-201ENST00000463506 460 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 MTCYBP16-201ENST00000509187 1129 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 NDUFB4P12-201ENST00000513465 390 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 SETP21-201ENST00000514799 892 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 RNA5SP287-201ENST00000516358 103 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXC12P31275 AP001124.1-201ENST00000529628 385 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 OR9G2P-201ENST00000533326 880 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 PDCL2P2-201ENST00000533651 189 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXC12P31275 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXC12P31275 BMS1P15-201ENST00000554269 1141 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC103987.3-201ENST00000582071 292 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.64□□□□□ -1.35
HOXC12P31275 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AP001554.1-201ENST00000604533 376 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AL583856.2-201ENST00000606298 543 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 AL450489.1-201ENST00000612071 468 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 MIR6070-201ENST00000613967 103 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC243725.1-201ENST00000637164 436 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 ZNF663P-202ENST00000641770 1131 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 AC104446.1-201ENST00000613728 1321 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC083806.2-201ENST00000617795 2685 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 MTND4P4-201ENST00000439033 1366 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 AC111188.2-201ENST00000529697 1387 ntBASIC6.64□□□□□ -1.35
HOXC12P31275 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC12P31275 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.64□□□□□ -1.35
HOXC12P31275 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.63□□□□□ -1.35
HOXC12P31275 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms