Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHC1P29353 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHC1P29353 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.68□□□□□ -1.5
SHC1P29353 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 ZNF101P1-201ENST00000435701 1720 ntBASIC5.68□□□□□ -1.5
SHC1P29353 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
SHC1P29353 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SHC1P29353 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 RNA5SP478-201ENST00000364657 115 ntBASIC5.68□□□□□ -1.5
SHC1P29353 RNA5SP279-201ENST00000365513 117 ntBASIC5.68□□□□□ -1.5
SHC1P29353 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 CYP4F30P-202ENST00000420048 405 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.68□□□□□ -1.5
SHC1P29353 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 AL121578.1-201ENST00000428051 892 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AL354893.1-201ENST00000433735 348 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.68□□□□□ -1.5
SHC1P29353 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.68□□□□□ -1.5
SHC1P29353 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.68□□□□□ -1.5
SHC1P29353 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 OR7E22P-201ENST00000478335 1035 ntBASIC5.68□□□□□ -1.5
SHC1P29353 PPP1R11P1-201ENST00000486095 376 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.68□□□□□ -1.5
SHC1P29353 OR4D12P-201ENST00000509361 911 ntBASIC5.68□□□□□ -1.5
SHC1P29353 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.68□□□□□ -1.5
SHC1P29353 HMGN1P17-201ENST00000513734 295 ntBASIC5.68□□□□□ -1.5
SHC1P29353 ZNF519P4-201ENST00000514008 125 ntBASIC5.68□□□□□ -1.5
SHC1P29353 RNA5SP441-201ENST00000516809 88 ntBASIC5.68□□□□□ -1.5
SHC1P29353 SNORA81.2-201ENST00000516868 170 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.68□□□□□ -1.5
SHC1P29353 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.68□□□□□ -1.5
SHC1P29353 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.68□□□□□ -1.5
SHC1P29353 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.68□□□□□ -1.5
SHC1P29353 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.68□□□□□ -1.5
SHC1P29353 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.68□□□□□ -1.5
SHC1P29353 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.68□□□□□ -1.5
SHC1P29353 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.68□□□□□ -1.5
SHC1P29353 AL135999.3-201ENST00000610501 812 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.68□□□□□ -1.5
SHC1P29353 AC022726.2-201ENST00000634673 547 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AC111152.1-202ENST00000635848 339 ntBASIC5.68□□□□□ -1.5
SHC1P29353 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 SHQ1P1-201ENST00000437111 1544 ntBASIC5.68□□□□□ -1.5
SHC1P29353 AC018717.1-201ENST00000457712 1505 ntBASIC5.68□□□□□ -1.5
SHC1P29353 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHC1P29353 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHC1P29353 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 AC123769.1-201ENST00000530992 3192 ntBASIC5.67□□□□□ -1.5
SHC1P29353 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
SHC1P29353 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.67□□□□□ -1.5
SHC1P29353 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHC1P29353 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.67□□□□□ -1.5
SHC1P29353 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHC1P29353 RNA5SP346-201ENST00000363541 121 ntBASIC5.67□□□□□ -1.5
SHC1P29353 RNA5SP232-201ENST00000364144 119 ntBASIC5.67□□□□□ -1.5
SHC1P29353 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SHC1P29353 MIR188-201ENST00000385034 86 ntBASIC5.67□□□□□ -1.5
SHC1P29353 RN7SKP121-201ENST00000410842 305 ntBASIC5.67□□□□□ -1.5
SHC1P29353 UBE2V1P14-201ENST00000415815 558 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AC007562.1-201ENST00000421819 517 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.67□□□□□ -1.5
SHC1P29353 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.67□□□□□ -1.5
SHC1P29353 SOCS5P1-201ENST00000440415 949 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AC023274.2-201ENST00000445264 521 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHC1P29353 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.67□□□□□ -1.5
SHC1P29353 AL022319.1-201ENST00000458183 1167 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AC114982.2-201ENST00000461396 358 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AC104339.1-201ENST00000465478 348 ntBASIC5.67□□□□□ -1.5
SHC1P29353 RN7SL221P-201ENST00000466190 281 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AOX3P-204ENST00000491025 2107 ntBASIC5.67□□□□□ -1.5
SHC1P29353 RPS27P20-201ENST00000492051 246 ntBASIC5.67□□□□□ -1.5
SHC1P29353 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.67□□□□□ -1.5
SHC1P29353 AC112484.3-201ENST00000505910 329 ntBASIC5.67□□□□□ -1.5
SHC1P29353 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.67□□□□□ -1.5
SHC1P29353 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.67□□□□□ -1.5
SHC1P29353 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.67□□□□□ -1.5
SHC1P29353 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.67□□□□□ -1.5
SHC1P29353 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.67□□□□□ -1.5
SHC1P29353 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.67□□□□□ -1.5
SHC1P29353 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.67□□□□□ -1.5
SHC1P29353 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SHC1P29353 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms