Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL6A2P12110 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.84□□□□□ -1.32
COL6A2P12110 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL6A2P12110 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.84□□□□□ -1.32
COL6A2P12110 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL6A2P12110 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL6A2P12110 OLMALINC-203ENST00000641087 3779 ntBASIC6.84□□□□□ -1.32
COL6A2P12110 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.84□□□□□ -1.32
COL6A2P12110 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL6A2P12110 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 AC093278.2-201ENST00000564956 2485 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
COL6A2P12110 RNU6-481P-201ENST00000384194 107 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL6A2P12110 AP002784.2-201ENST00000397300 549 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AL359715.1-201ENST00000404330 555 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 RNU2-5P-201ENST00000410533 180 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AL158825.1-201ENST00000414735 521 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 MTCYBP7-201ENST00000419540 1134 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 AC093107.1-201ENST00000422772 609 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AC046176.1-201ENST00000435260 1170 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 CRYGGP-201ENST00000443337 145 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 RPL6P30-201ENST00000443382 862 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AC008620.1-201ENST00000468453 592 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 AC109464.1-201ENST00000511091 819 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 AP003084.1-201ENST00000524828 742 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AP000662.1-201ENST00000530952 487 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 NXPE2P1-201ENST00000543705 726 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.83□□□□□ -1.32
COL6A2P12110 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 MIR4301-201ENST00000577203 66 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 NDUFA3P1-201ENST00000588007 252 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AC015726.1-201ENST00000602353 681 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AL683813.2-201ENST00000605245 502 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 AC010333.3-201ENST00000615100 402 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 MAPK10-261ENST00000641050 3109 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.83□□□□□ -1.32
COL6A2P12110 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
COL6A2P12110 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.83□□□□□ -1.32
COL6A2P12110 TATDN2P3-201ENST00000452855 3665 ntBASIC6.83□□□□□ -1.32
COL6A2P12110 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL6A2P12110 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.82□□□□□ -1.32
COL6A2P12110 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 AC073365.1-203ENST00000641055 1992 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COL6A2P12110 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 QRSL1P3-201ENST00000552666 1316 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL6A2P12110 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL6A2P12110 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL6A2P12110 RNA5SP65-201ENST00000363166 119 ntBASIC6.82□□□□□ -1.32
COL6A2P12110 RNA5SP333-201ENST00000363466 118 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms