Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 RN7SL369P-201ENST00000477138 299 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AC114324.2-202ENST00000503812 134 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 CYP4F27P-201ENST00000514557 494 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AC093816.1-201ENST00000515076 913 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 RNU2-45P-201ENST00000516068 187 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 IGKV2-19-201ENST00000518132 283 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 IGHV4-55-201ENST00000520889 368 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.19□□□□□ -1.58
SDCBPO00560 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 AC025283.1-201ENST00000572039 734 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 RN7SL66P-201ENST00000582099 264 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 MIR212-201ENST00000586026 110 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 AC005332.4-201ENST00000592752 579 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 AC018628.1-201ENST00000624147 3819 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AP001153.1-201ENST00000641024 338 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 AL136984.1-201ENST00000607611 1893 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 ZNF969P-201ENST00000510345 2341 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 AL137141.1-201ENST00000624622 4836 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SDCBPO00560 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.18□□□□□ -1.58
SDCBPO00560 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SDCBPO00560 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 SNORD1C-201ENST00000363315 78 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AL121977.1-201ENST00000401636 979 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.18□□□□□ -1.58
SDCBPO00560 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.18□□□□□ -1.58
SDCBPO00560 AL360013.1-201ENST00000419031 858 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.18□□□□□ -1.58
SDCBPO00560 RPS3AP38-201ENST00000435889 763 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 PA2G4P1-201ENST00000442248 1197 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 COX4I1P2-201ENST00000447446 547 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.18□□□□□ -1.58
SDCBPO00560 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SDCBPO00560 RAB28P2-201ENST00000454299 641 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.18□□□□□ -1.58
SDCBPO00560 RN7SL39P-201ENST00000462264 297 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 RN7SL643P-201ENST00000471845 291 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 GM2AP2-201ENST00000491764 562 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.18□□□□□ -1.58
SDCBPO00560 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 AC113191.1-201ENST00000517759 403 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 CYCSP25-201ENST00000525280 316 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AC135983.3-201ENST00000528049 1226 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AC124891.1-201ENST00000536322 519 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.18□□□□□ -1.58
SDCBPO00560 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 AC022001.1-201ENST00000605193 268 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 OR7A1P-202ENST00000641542 1158 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 MAPK10-350ENST00000641777 965 ntBASIC5.18□□□□□ -1.58
SDCBPO00560 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
SDCBPO00560 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SDCBPO00560 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SDCBPO00560 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 356.9 ms