Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.39□□□□□ -1.39
NEDD8-MDP1E9PL57 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD8-MDP1E9PL57 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD8-MDP1E9PL57 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
NEDD8-MDP1E9PL57 AC007406.5-201ENST00000570140 3170 ntBASIC6.39□□□□□ -1.39
NEDD8-MDP1E9PL57 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC023632.6-201ENST00000624338 2177 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC013268.3-201ENST00000262716 2324 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 RN7SKP269-201ENST00000365545 319 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AL445238.1-204ENST00000400311 463 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC092967.1-201ENST00000449016 481 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 RNA5SP340-201ENST00000517132 107 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC021269.1-201ENST00000526860 705 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC108865.2-201ENST00000606881 432 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC024255.1-201ENST00000614376 102 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 MTCO1P28-201ENST00000574177 1528 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 AC008627.1-201ENST00000517511 1704 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 CCAT2-201ENST00000630920 1752 ntBASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.38□□□□□ -1.39
NEDD8-MDP1E9PL57 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 CASC19-238ENST00000641523 1558 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 RPS29P14-201ENST00000431518 171 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 HLA-DPA3-207ENST00000454398 229 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AC006499.4-201ENST00000510947 694 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 LINC00556-201ENST00000569603 412 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AC012254.5-201ENST00000623573 478 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 MAPK10-287ENST00000641217 3037 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AC024651.2-201ENST00000562480 2098 ntBASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.37□□□□□ -1.39
NEDD8-MDP1E9PL57 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NEDD8-MDP1E9PL57 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NEDD8-MDP1E9PL57 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.36□□□□□ -1.39
NEDD8-MDP1E9PL57 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NEDD8-MDP1E9PL57 UGT2B27P-201ENST00000505092 1620 ntBASIC6.36□□□□□ -1.39
NEDD8-MDP1E9PL57 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
NEDD8-MDP1E9PL57 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.36□□□□□ -1.39
NEDD8-MDP1E9PL57 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms