Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CTDP1Q9Y5B0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AL139384.2-201ENST00000613809 3590 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 SNORD35A-201ENST00000363389 86 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AL391419.1-201ENST00000398901 1275 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 DHFRP5-201ENST00000406944 564 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC096537.2-201ENST00000413707 714 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC013410.1-201ENST00000436223 1232 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC117395.1-201ENST00000487390 403 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 GM2AP2-201ENST00000491764 562 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 PFN1P8-201ENST00000497012 543 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 H3F3AP3-201ENST00000497682 407 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC018645.1-201ENST00000505003 109 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 SCARNA5-201ENST00000516201 276 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC026826.3-201ENST00000561747 158 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC026898.1-201ENST00000586404 571 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC004223.2-201ENST00000590309 544 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AL391834.2-201ENST00000609982 546 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AL135999.3-201ENST00000610501 812 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 ENO1P4-201ENST00000416471 1785 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC092725.2-201ENST00000567658 1389 ntBASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CTDP1Q9Y5B0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL136520.1-201ENST00000600311 1322 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC233968.1-201ENST00000611212 1300 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 CCAT2-201ENST00000630920 1752 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 MIR188-201ENST00000385034 86 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 RPL5P20-201ENST00000403848 896 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL355143.1-201ENST00000407101 841 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 OSTCP4-201ENST00000424397 449 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC108479.1-201ENST00000431142 427 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 PSMD10P2-201ENST00000432890 672 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AL645638.1-201ENST00000440519 361 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC022206.1-201ENST00000495947 347 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC002310.3-201ENST00000569728 723 ntBASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.54□□□□□ -1.2
CTDP1Q9Y5B0 SMIM12P1-201ENST00000603004 274 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms