Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 UGT2B27P-201ENST00000505092 1620 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 RPL12P13-201ENST00000310055 497 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 YWHAZP6-201ENST00000399764 738 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AL049697.3-201ENST00000406493 982 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 RNA5SP431-201ENST00000410312 120 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC013410.2-201ENST00000422627 201 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC108479.1-201ENST00000431142 427 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 OR2L9P-201ENST00000444456 913 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AL358876.1-201ENST00000453364 1075 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 SCARNA5-201ENST00000516201 276 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC008429.2-201ENST00000523057 864 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 NATP-201ENST00000523491 878 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC005363.1-201ENST00000530779 351 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 SNORA70D-201ENST00000578836 135 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 MIR4502-201ENST00000580432 81 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AL135999.3-201ENST00000610501 812 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 MIR6085-201ENST00000618314 110 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 AC009120.7-201ENST00000623452 780 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 FO082842.1-201ENST00000423552 1370 ntBASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 QRSL1P1-201ENST00000400977 1540 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC024341.1-201ENST00000526444 1552 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AL139805.1-201ENST00000407837 289 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AL356806.1-201ENST00000422524 916 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 RPL7AP14-201ENST00000424041 802 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ELOCP6-201ENST00000429066 328 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC069154.1-201ENST00000432914 542 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 GAPDHP59-201ENST00000435908 267 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ELOCP12-201ENST00000458706 328 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC018645.1-201ENST00000505003 109 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 SNORA81.2-201ENST00000516868 170 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC011921.2-201ENST00000589465 152 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 IFIT1P1-201ENST00000400497 1449 ntBASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSX2IPQ9Y2D8 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms