Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RSL24D1P4-201ENST00000400938 484 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AL096711.1-201ENST00000404780 554 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 PGBD4P8-201ENST00000412993 562 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC098592.1-201ENST00000419352 333 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AL049610.1-201ENST00000423374 372 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AL022331.1-201ENST00000429025 477 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 RPL5P27-201ENST00000437011 881 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 MTCYBP34-201ENST00000439552 670 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 SUMO2P2-201ENST00000456482 255 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC069528.1-202ENST00000482888 637 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 CDC42P4-201ENST00000510507 563 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 NDUFA5P2-201ENST00000519723 344 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC008147.3-201ENST00000548666 354 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC069240.2-201ENST00000550242 609 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 NDUFA3P4-201ENST00000560814 250 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 MT1CP-201ENST00000567054 174 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 RPL7AP69-201ENST00000595306 806 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 VN1R90P-201ENST00000595717 726 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC119501.1-201ENST00000603646 475 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC009237.12-201ENST00000604755 742 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AL359757.1-201ENST00000623176 255 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC023818.2-201ENST00000623817 2304 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 HDAC1P1-201ENST00000455482 1445 ntBASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ZC3H4Q9UPT8 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 RPSAP72-201ENST00000407020 358 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 RPLP1P10-201ENST00000413972 339 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AK4P4-201ENST00000419465 646 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 CENPIP1-201ENST00000425713 902 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 RPS4XP16-201ENST00000427198 791 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC009263.1-201ENST00000441193 1239 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 RBMX2P4-201ENST00000441256 376 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC007383.1-201ENST00000445875 636 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AL671855.1-201ENST00000446875 1203 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 CYCSP44-201ENST00000448560 313 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC091982.1-202ENST00000473923 343 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC069304.1-201ENST00000491593 704 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 HNRNPA1P44-201ENST00000503999 879 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 SERPINA15P-201ENST00000529287 266 ntBASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC8.96□□□□□ -0.98
ZC3H4Q9UPT8 AP002884.5-201ENST00000595053 1132 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms