Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC090958.1-201ENST00000511122 351 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC073916.1-201ENST00000545095 130 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC027667.1-201ENST00000545814 304 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC090115.2-201ENST00000548060 883 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC092332.1-201ENST00000563684 829 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC005726.4-201ENST00000582858 458 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC009135.2-201ENST00000624136 1768 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AL731556.1-201ENST00000394628 3711 ntBASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.57□□□□□ -1.52
CLCF1Q9UBD9 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC009779.8-201ENST00000641684 4384 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 EIF3EP1-201ENST00000433978 1316 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 UBE2V1P14-201ENST00000415815 558 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC023141.3-201ENST00000436698 278 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 VPS25P1-201ENST00000455691 508 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 RANP2-201ENST00000456833 229 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 LSM3P4-201ENST00000502948 309 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 RNA5SP116-201ENST00000516132 98 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 CYCSP38-201ENST00000559840 322 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC008507.3-201ENST00000585753 472 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 CYCSP1-201ENST00000604815 315 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC006924.1-201ENST00000610750 559 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC004801.6-201ENST00000616571 978 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AL512652.1-201ENST00000619006 500 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 GUCY1B2-204ENST00000531898 1979 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 TNPO1P2-201ENST00000426249 2665 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AC093225.1-201ENST00000506867 1408 ntBASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLCF1Q9UBD9 AL354854.1-201ENST00000455940 1363 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 LYARP1-201ENST00000436977 1501 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 SNORA21-201ENST00000362423 132 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 RN7SKP15-201ENST00000364742 309 ntBASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCF1Q9UBD9 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms