Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RPL5P9-201ENST00000448118 886 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 RBMY3AP-201ENST00000449381 1145 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 MTND2P6-201ENST00000455337 1030 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 RPS7P10-201ENST00000464254 603 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC078857.1-201ENST00000469870 667 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 RN7SL382P-201ENST00000482631 282 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 RPL29P23-201ENST00000486188 442 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC104629.1-201ENST00000494226 508 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 RN7SKP98-201ENST00000517070 156 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 VTA1P2-201ENST00000520205 911 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC005519.1-201ENST00000554490 601 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 CTSLP2-201ENST00000580501 394 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 RPL29P33-201ENST00000587474 316 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC005776.1-201ENST00000603164 290 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 BNIP3P19-201ENST00000605397 577 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 MIR7854-201ENST00000620068 65 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC061999.1-201ENST00000624454 177 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL035425.4-201ENST00000624509 1063 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AL355480.1-201ENST00000629041 99 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC106858.1-201ENST00000637497 429 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 KARSP1-201ENST00000451871 1752 ntBASIC6.2□□□□□ -1.42
LRFN1Q9P244 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LRFN1Q9P244 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.2□□□□□ -1.42
LRFN1Q9P244 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AL133260.1-201ENST00000405720 405 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 MTND4LP13-201ENST00000425022 298 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 BMP6P1-201ENST00000431230 679 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC128677.1-201ENST00000436016 442 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 MTCYBP29-201ENST00000436327 1006 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 SCAND3P1-201ENST00000439854 1060 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 GAPDHP37-201ENST00000442317 968 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 DEFA11P-201ENST00000446470 261 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AL390198.2-201ENST00000510553 222 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LRFN1Q9P244 RNU6-1102P-201ENST00000516149 96 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC019227.1-201ENST00000526902 510 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC090888.3-201ENST00000558917 509 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 SNORD39.2-201ENST00000579995 76 ntBASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.19□□□□□ -1.42
LRFN1Q9P244 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms