Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 DOCK11P1-201ENST00000553480 5932 ntBASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TM9SF3Q9HD45 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 MAPK10-261ENST00000641050 3109 ntBASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.4□□□□□ -1.39
TM9SF3Q9HD45 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC034229.2-201ENST00000566945 2508 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC068228.1-201ENST00000461723 211 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 RBBP4P1-201ENST00000502424 1276 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC036111.2-201ENST00000533247 901 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 RN7SL475P-201ENST00000583379 298 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC067773.1-201ENST00000603284 1094 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC108865.2-201ENST00000606881 432 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 LYARP1-201ENST00000436977 1501 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AL662795.2-201ENST00000624252 3706 ntBASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
TM9SF3Q9HD45 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AL731556.1-201ENST00000394628 3711 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 SNORA70.9-201ENST00000384370 135 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 RPL23AP85-201ENST00000421838 433 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 UBE2V2P4-201ENST00000447495 259 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC135999.1-201ENST00000478962 479 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 RN7SKP35-201ENST00000517210 151 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 TPRX1P1-201ENST00000557620 319 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 BUB1P1-201ENST00000603541 607 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC091193.1-201ENST00000604640 448 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AL139041.1-201ENST00000605480 610 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 SNORA74.4-201ENST00000607595 199 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AL352984.2-202ENST00000613699 155 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AP001885.1-201ENST00000621658 558 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC018659.2-201ENST00000624690 715 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 AC007485.2-201ENST00000623493 1667 ntBASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.38□□□□□ -1.39
TM9SF3Q9HD45 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms