Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 RNA5SP321-201ENST00000362722 111 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 RN7SKP91-201ENST00000410852 288 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 MARK2P12-201ENST00000420129 585 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AHCYP8-201ENST00000425108 209 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL645638.1-201ENST00000440519 361 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 Z99127.2-201ENST00000441426 334 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL845321.1-201ENST00000444603 348 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 TREML3P-201ENST00000457327 501 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC105918.1-201ENST00000474399 838 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC096661.1-201ENST00000515870 822 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 PHBP2-201ENST00000532859 806 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL162632.2-201ENST00000553933 399 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 MIR4760-201ENST00000585040 80 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC133794.1-201ENST00000602731 914 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL512430.4-201ENST00000603085 613 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC097467.4-201ENST00000605504 141 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC005828.7-201ENST00000607331 556 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC005277.2-201ENST00000617898 390 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 DNM1P47-203ENST00000571780 12667 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MIR27A-201ENST00000385073 78 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AL359694.1-201ENST00000403247 604 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MTND4LP17-201ENST00000414607 293 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AL929472.1-201ENST00000417484 429 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 VN1R37P-201ENST00000419096 748 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AL672212.1-201ENST00000422246 400 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 RPS26P4-201ENST00000431743 355 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AL606490.7-201ENST00000433136 191 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MGAT2P1-201ENST00000449718 797 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AL133480.2-201ENST00000456723 487 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 UOX-201ENST00000471089 899 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 RPEP1-201ENST00000504507 658 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 RNA5SP116-201ENST00000516132 98 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC103833.1-201ENST00000517442 172 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 IGKV2-4-201ENST00000523070 340 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC130366.1-201ENST00000526505 1192 ntBASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM54Q9BYV2 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms