Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RPL31P53-201ENST00000457065 348 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC090958.1-201ENST00000511122 351 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RNA5SP434-201ENST00000516647 121 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC027544.3-201ENST00000535082 757 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AL731537.2-201ENST00000561565 951 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC107993.1-201ENST00000591343 684 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC006600.2-201ENST00000624834 2506 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RTFDC1Q9BY42 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.71□□□□□ -1.17
RTFDC1Q9BY42 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
RTFDC1Q9BY42 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
RTFDC1Q9BY42 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
RTFDC1Q9BY42 AL157831.2-201ENST00000564681 3095 ntBASIC7.71□□□□□ -1.17
RTFDC1Q9BY42 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.71□□□□□ -1.17
RTFDC1Q9BY42 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 OR52B3P-201ENST00000314715 928 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AJ239321.1-201ENST00000424255 564 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 C1DP3-201ENST00000455013 423 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 OR4A42P-201ENST00000531397 938 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 MRPS21P9-201ENST00000571150 257 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC009237.12-201ENST00000604755 742 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AL591167.1-201ENST00000607321 456 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC073342.2-201ENST00000595842 1800 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 AC241584.2-201ENST00000637142 2090 ntBASIC7.71□□□□□ -1.18
RTFDC1Q9BY42 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 BX322650.1-201ENST00000332359 2143 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 RARSP1-201ENST00000542842 1418 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 OR51C1P-202ENST00000641159 1444 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 MIR323A-201ENST00000362199 86 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AL096711.1-201ENST00000404780 554 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AC019070.1-201ENST00000415008 1024 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AC106901.1-201ENST00000425086 698 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 DNAJC19P5-201ENST00000443295 316 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AL139156.3-201ENST00000454802 394 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 RPS27AP2-201ENST00000457576 465 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 NPM1P52-201ENST00000518264 846 ntBASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.7□□□□□ -1.18
RTFDC1Q9BY42 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms