Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC007671.1-201ENST00000616957 830 ntBASIC4.84□□□□□ -1.63
VGLL1Q99990 AC103564.3-201ENST00000621194 220 ntBASIC4.84□□□□□ -1.63
VGLL1Q99990 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.84□□□□□ -1.63
VGLL1Q99990 AL139254.3-201ENST00000641097 674 ntBASIC4.84□□□□□ -1.63
VGLL1Q99990 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VGLL1Q99990 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VGLL1Q99990 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
VGLL1Q99990 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
VGLL1Q99990 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.84□□□□□ -1.64
VGLL1Q99990 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC4.84□□□□□ -1.64
VGLL1Q99990 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.84□□□□□ -1.64
VGLL1Q99990 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.83□□□□□ -1.64
VGLL1Q99990 SAGE3P-201ENST00000619800 1635 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AC095038.1-201ENST00000429248 1591 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC016745.2-201ENST00000608834 3443 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.83□□□□□ -1.64
VGLL1Q99990 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VGLL1Q99990 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VGLL1Q99990 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VGLL1Q99990 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VGLL1Q99990 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 AL079341.1-201ENST00000404701 1207 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 RNU2-72P-201ENST00000411175 163 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 SETP22-201ENST00000412243 957 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.83□□□□□ -1.64
VGLL1Q99990 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 MICG-208ENST00000416822 132 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 MRPS21P5-201ENST00000417885 231 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 CYP4F30P-202ENST00000420048 405 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AL138479.1-201ENST00000426913 484 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 RAD1P2-201ENST00000446414 663 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AC092967.1-201ENST00000449016 481 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 RPS10P28-201ENST00000480396 498 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 RPL19P11-201ENST00000495944 589 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC134698.1-201ENST00000511619 643 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC112206.4-201ENST00000515142 405 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.83□□□□□ -1.64
VGLL1Q99990 SCARNA5-201ENST00000516201 276 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.83□□□□□ -1.64
VGLL1Q99990 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.83□□□□□ -1.64
VGLL1Q99990 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 CCL2-202ENST00000580907 736 ntTSL 2 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC245052.7-201ENST00000601161 359 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.83□□□□□ -1.64
VGLL1Q99990 BNIP3P35-201ENST00000604530 490 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AL353807.4-201ENST00000604995 257 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 SNORD96A-201ENST00000606577 79 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC027559.1-201ENST00000636288 271 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AP000550.3-201ENST00000637734 379 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.83□□□□□ -1.64
VGLL1Q99990 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 AC020656.2-201ENST00000613291 5309 ntBASIC4.83□□□□□ -1.64
VGLL1Q99990 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
VGLL1Q99990 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.83□□□□□ -1.64
VGLL1Q99990 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VGLL1Q99990 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
VGLL1Q99990 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VGLL1Q99990 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
VGLL1Q99990 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VGLL1Q99990 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VGLL1Q99990 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VGLL1Q99990 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VGLL1Q99990 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VGLL1Q99990 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VGLL1Q99990 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VGLL1Q99990 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VGLL1Q99990 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms