Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 CLUHP5-201ENST00000438421 774 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 NANOGP9-201ENST00000439890 892 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 Z77249.1-201ENST00000444622 1175 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 RPL5P10-201ENST00000445207 894 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 HMGB1P26-201ENST00000452520 628 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC018892.2-201ENST00000457656 693 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AL445687.2-201ENST00000458156 728 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC104849.1-201ENST00000462623 405 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC063955.1-201ENST00000462872 685 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 RN7SL221P-201ENST00000466190 281 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 RN7SL688P-201ENST00000471754 275 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC135999.1-201ENST00000478962 479 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 HMGB1P38-201ENST00000490557 577 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AL035690.1-201ENST00000490892 383 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AOX3P-204ENST00000491025 2107 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 OR5H3P-201ENST00000502817 919 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC008427.1-201ENST00000503102 655 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC021146.11-201ENST00000503319 491 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC020699.1-201ENST00000505161 445 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 RNU6-1334P-201ENST00000516032 105 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 DUXAP5-201ENST00000529668 529 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC023538.1-201ENST00000534576 736 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 OR8K4P-201ENST00000534608 872 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC144548.1-201ENST00000549577 324 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC087888.1-201ENST00000550884 1254 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC025918.2-201ENST00000558683 763 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC044860.3-201ENST00000559957 368 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AL031846.1-201ENST00000560933 314 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 NQO1-205ENST00000561500 891 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 CDH13-207ENST00000565636 810 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 RN7SL270P-201ENST00000579643 281 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC4.38□□□□□ -1.71
LITAFQ99732 BUB1P1-201ENST00000603541 607 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AL356986.1-201ENST00000604085 341 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 RN7SL126P-201ENST00000616400 299 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AL353898.2-201ENST00000623000 255 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC133485.6-201ENST00000624045 688 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AC120349.3-201ENST00000624377 529 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 OR5AC4P-202ENST00000642086 985 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 MAPK10-287ENST00000641217 3037 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.38□□□□□ -1.71
LITAFQ99732 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.38□□□□□ -1.71
LITAFQ99732 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 AC010168.2-201ENST00000562691 5428 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 AL049869.1-201ENST00000556933 1402 ntBASIC4.38□□□□□ -1.71
LITAFQ99732 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LITAFQ99732 AC092646.2-201ENST00000431242 2095 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LITAFQ99732 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 BIN2P1-201ENST00000504996 1530 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC092692.1-201ENST00000623625 2595 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LITAFQ99732 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
LITAFQ99732 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LITAFQ99732 HMGB1P39-201ENST00000366304 880 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms