Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 RNU4ATAC-201ENST00000580972 127 ntBASIC9.95□□□□□ -0.82
IFT140Q96RY7 AC105105.5-201ENST00000622635 1294 ntBASIC9.95□□□□□ -0.82
IFT140Q96RY7 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
IFT140Q96RY7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
IFT140Q96RY7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
IFT140Q96RY7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
IFT140Q96RY7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
IFT140Q96RY7 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
IFT140Q96RY7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
IFT140Q96RY7 SALL4P7-201ENST00000555779 3120 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 AL589647.1-201ENST00000402485 466 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 GABARAPL3-201ENST00000412799 354 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 SLC35E1P1-201ENST00000419313 864 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 AL139415.1-201ENST00000424862 352 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 AC083795.1-201ENST00000491760 320 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 AC119403.2-201ENST00000590960 598 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 AP000550.3-201ENST00000637734 379 ntBASIC9.94□□□□□ -0.82
IFT140Q96RY7 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
IFT140Q96RY7 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
IFT140Q96RY7 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
IFT140Q96RY7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
IFT140Q96RY7 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
IFT140Q96RY7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
IFT140Q96RY7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 SRRM1P3-201ENST00000426911 2678 ntBASIC9.93□□□□□ -0.82
IFT140Q96RY7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
IFT140Q96RY7 EIF4A1P7-201ENST00000421800 1220 ntBASIC9.93□□□□□ -0.82
IFT140Q96RY7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC9.93□□□□□ -0.82
IFT140Q96RY7 CYCSP12-201ENST00000437729 300 ntBASIC9.93□□□□□ -0.82
IFT140Q96RY7 RPS4XP1-201ENST00000482189 787 ntBASIC9.93□□□□□ -0.82
IFT140Q96RY7 NPM1P27-201ENST00000502784 830 ntBASIC9.93□□□□□ -0.82
IFT140Q96RY7 OR51A1P-201ENST00000511110 946 ntBASIC9.93□□□□□ -0.82
IFT140Q96RY7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC9.93□□□□□ -0.82
IFT140Q96RY7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC9.93□□□□□ -0.82
IFT140Q96RY7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC9.93□□□□□ -0.82
IFT140Q96RY7 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
IFT140Q96RY7 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
IFT140Q96RY7 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 RNA5SP333-201ENST00000363466 118 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 RNA5SP334-201ENST00000364825 118 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 MIR433-201ENST00000384837 93 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 MIR765-201ENST00000390226 114 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 VDAC1P2-201ENST00000423609 850 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 VDAC1P6-201ENST00000430062 855 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 MORF4L1P5-201ENST00000433352 961 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 AL672167.3-201ENST00000465951 960 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 RPS21P4-201ENST00000487122 248 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 AC106800.2-201ENST00000514009 1103 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 DCN-210ENST00000547568 823 ntTSL 3 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 CR383656.6-201ENST00000550518 394 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
IFT140Q96RY7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
IFT140Q96RY7 AC105235.1-201ENST00000623208 1816 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
IFT140Q96RY7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
IFT140Q96RY7 CLCA3P-203ENST00000490028 2781 ntBASIC9.92□□□□□ -0.82
IFT140Q96RY7 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
IFT140Q96RY7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
IFT140Q96RY7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
IFT140Q96RY7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
IFT140Q96RY7 OR10R3P-201ENST00000361688 942 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 FAR2P2-201ENST00000413041 594 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 FAR2P4-202ENST00000425399 584 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 MGAT2P1-201ENST00000449718 797 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms