Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 OR8B1P-202ENST00000641132 1178 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC005614.1-201ENST00000598952 3653 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC091544.5-201ENST00000620192 3815 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC090771.1-201ENST00000585803 1618 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 RNU6-623P-201ENST00000363143 105 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 RNU6-1017P-201ENST00000363613 106 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 MIR421-201ENST00000365696 85 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 SNORA79B-201ENST00000410557 148 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 RNU4-27P-201ENST00000410889 139 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 RNA5SP155-201ENST00000411154 129 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 RPL7P33-201ENST00000444159 742 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AL121578.2-201ENST00000448797 447 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 HMGB1P26-201ENST00000452520 628 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC006539.1-201ENST00000481419 501 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC010625.1-201ENST00000511296 403 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 IGKV2D-38-201ENST00000518423 240 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 OR7E154P-201ENST00000525174 932 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 OR4A1P-201ENST00000532342 920 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AGGF1P9-201ENST00000561884 913 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 OR7M1P-201ENST00000608946 533 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AL031667.3-201ENST00000620124 655 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 AL390318.1-201ENST00000624564 687 ntBASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SYNGAP1Q96PV0 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 AC005261.4-201ENST00000600047 1385 ntBASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 AC025263.3-201ENST00000622965 1396 ntBASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 FANCD2P2-201ENST00000437591 1400 ntBASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNGAP1Q96PV0 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms